Pseudomonas oryzihabitans NBRC 102199, POR01S_RS17270
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACGGCGGCATCAAGCTGGGTACCGGCGGCCTGGTGCGCGCCTATGGCGGTTGCGCCGCCCGTTGCCTGCAACAGGCGGACAAGCAGCCGCTGGTGGTGCG GCAGGACTATGGCTTCGCCTGTACCTATGCGGAGTGGCCGCTGATCAAGGCTCGCCTGGCAGCCCTGGCGGTGCTCGTGCTCGCCGAGGACTATCAGGCG CTGGAGATCGACTTGCGGATTGCGGTCGAGCCCCAGCGACGCGACGAAGTAGCGACGCTGCTGAGCAATCTGAGCAGTGGACGTATCGTGATGCGTGCGC TCTAGCGGCACGACCTTTGCTATCTCCTGGTGCACGCCCTTCCGATTCGCACCGCCCTGGCGCATCCCCGCGCTAATTCCCCGTTGCGCTCTGCTTGGCG GCAAGACTGAACCTGCCGAGAGCTGCAGCACGCCCTAAAAGCGCGCATCAAGCAGCCGCCAGGCATGTTTTTGGTGCAACCCTTAGCGACGACTGCCCTG
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| DNA Sequence for Gene |
>POR01S_RS17270
ATGAACGAATTGCCTTCCGCTGTGGCGACCCTGGTCCACAGTGCCAATACCCTGTTCCTGCTGCTGGGTGCCGTGATGGTGCTGGCCATGCACGCCGGTT TCGCCTTTCTCGAAGCCGGTACCGTGCGGCACAAGAATCAGGTGAACGCGCTGTCCAAGATCCTCGCCGACTTCGCCATTTCCACCCTGGTGTATTTCTT CGTCGGCTACTGGATCGCCTATGGCGTGACGTTCTTCGCGCCTGCCCAGGTGCTGACCGCCGACAGCGGCTATGGGCTGGTGAAGTTCTTTTTCCTCGCC ACCTTCGCCGCAGCCATCCCGGCGATCATCTCCGGCGGCATCGCCGAACGGGCGCGTTTCGTCCCGCAACTGTGCGCCACCGCGCTGATCGTGGCCTTCG TCTATCCGTTCTTCGAAGGCCTGATGTGGAACAACAACCTGGGGCTGCAGGACAGGTTCGAAGCGCTGTTCGGCGCGCGCTTCCACGATTTCGCCGGCTC CGTGGTGGTGCACGCCGTGGGTGGCTGGCTGGCGCTGGCGGCCGTGCTGCTGTTGGGGCCGCGTCAGGGTCGCTATCGCGAAGGCCGGCTGGTGGCCTTT CCGCCGTCGAACATCCCCTTTCTGGCGCTGGGCTCCTGGATCCTGATCGTCGGCTGGTTCGGTTTCAACGTGATGAGCGCCCAGAGCCTGGCAGGCGTCA GTGGCCTGGTCGCGCTGAATTCGCTGATGGCCATGGTCGGCGGGACGGCGGCTGCCCTGCTGCTCGGGCGCAACGACCCCGGCTTCCTGCACAACGGGCC CCTGGCCGGCCTGGTCGCCGTCTGTGCCGGCTCCGATCTGATGCATCCCATCGCCGCCCTGGCCACCGGGCTGGTGGCGGGCGCCCTGTTCGTCTGGGCC TTCACCGCAGTGCAGACGCGCTGGAAGCTGGACGATGTGCTGGGCGTCTGGCCGTTGCACGGCCTCTGCGGCGCCTGGGGCGGCATCGCCTGTGGCCTGT TCGGCCAGACCGCACTTGGCGGCCTGGGTGGGGTGAGCGTGCTGGCGCAACTGGCGGGCACGGGACTGGGTATCGGCGTCGCCCTGCTCGGCGGCCTGGC GGTGTACGGGCTGCTCAAGGCCGTGCTGGGGCTGCGTCTGAGTCAGGAAGAGGAATACCAGGGCGCCGACCTGTCGATCCATCGCATCGCCGCCAACAGC CACGACGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCCGAGGTTACCCACAGGGACCGTGTACAGTGATGTGGATAACCCGTGCATGAAGTCACGAGAACGCCACAGAGACCGGGCTGGCGGCGACTGGTGAA GAAATGAACACGGCCTCGATGTCGTGGCGGCGAACGGCGACGGCGGGACTCGGGTAGCCCACCGGCGACCGGAATCGGTAGAGTGGGCGACCCTTATTCC AGGAGCGCCCCATGCCCGCCCTTTCGACCCTGCTGCCCTGGCTCCGCGAGGTGGACCGCACCACCCTGAAGGCGGATCTTGGCGCGGGTCTGCTGGGCGC GGTCCTGGCGCTGCCCCAGGGCGTGGCCTTCGCCACCCTGGCCGGACTGCCTCCGCAATACGGCGTCTATGGCGCCGTGGTGCCCTGCATCGTCGCCGCC CTGGCGGGCTCCAGTCGCCATGTGGTGACCGGGCCGACCAACGCCAACTCCCTGGCCCTGCTGGCGGCGCTGTCTCCGCTGGCGCTGGCGGGCTCCGGCC
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| Amino Acid Sequence |
>ammonium transporter
MNELPSAVATLVHSANTLFLLLGAVMVLAMHAGFAFLEAGTVRHKNQVNALSKILADFAISTLVYFFVGYWIAYGVTFFAPAQVLTADSGYGLVKFFFLA TFAAAIPAIISGGIAERARFVPQLCATALIVAFVYPFFEGLMWNNNLGLQDRFEALFGARFHDFAGSVVVHAVGGWLALAAVLLLGPRQGRYREGRLVAF PPSNIPFLALGSWILIVGWFGFNVMSAQSLAGVSGLVALNSLMAMVGGTAAALLLGRNDPGFLHNGPLAGLVAVCAGSDLMHPIAALATGLVAGALFVWA FTAVQTRWKLDDVLGVWPLHGLCGAWGGIACGLFGQTALGGLGGVSVLAQLAGTGLGIGVALLGGLAVYGLLKAVLGLRLSQEEEYQGADLSIHRIAANS HDG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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