Pseudomonas oryzihabitans NBRC 102199, POR01S_RS22090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas oryzihabitans NBRC 102199, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCTCTTTCCTTAAGCACGGGATCCATCCCGGCCTGTTCCTCAGAGGAGCCCTATCATGGCACTGAGCGTTGAAGACAAAGCCCAGATCGTAAACGAGTT CAAGCAGAGCGAAGGCGACACCGGTTCCCCGGAAGTGCAGGTTGCCCTGCTGTCCGCCAACATCGACAAGCTGCAAGGTCACTTCAAGGCCAACGGCAAA GATCACCACAGCCGTCGTGGTCTGATCCGTATGGTCAACCAGCGTCGTAAGCTGCTGGACTACCTGAAGTCCAAGGACACCTCTCGTTACAGCGCACTGA TCGCTCGCCTGGGCCTGCGTCGTTAATACGATGCAGACCTGCTGCAAGCAGTCTGAAGCTGGAGGTCGGCTCGCGCCGGCCTCCGGCTTTTTTGCTTGAG AGGCCGACAGAATCGGCCTGCGTCACCCGGAGATCAGCGAGGGTCCGAATCCCTCTGGTCGCCCCCGTTTCCCCCAAGGCAATAAAGAGAAGGAAAGACT
DNA Sequence for Gene
>POR01S_RS22090
GTGAATCCAGTAATCAAGCAATTCAAGTTCGGTGAGCAGACCTTCACCCTGGAAACCGGCCGCATCGCGCGCCAGGCGACCGGTGCCGTGCTGGTCTCCA CCGAAGACGTCAGCGTGCTGGTCACCGTGGTCGGTGCCAAGCAGCCCGCCGTCGGCAAGGACTTCTTCCCGCTGTCCGTGCACTACCAGGAGAAGACCTA CGCCGCTGGCCGCATCCCCGGTGGCTACTTCAAGCGTGAAGGCCGTCCTTCCGAGAAGGAAACCCTGACCTCGCGCCTGATCGATCGCCCGATCCGCCCG CTGTTCCCCGAAGGCTTCCTCAACGAAGTCCAGGTGGTCTGCACCGTGGTCAGCACCAACAAGAAGTCCGATCCGGACATCGCCGCCATGATCGGCACCT CCGCCGCCCTGGCCATCTCCGGCATTCCCTTCGCCGGTCCCATCGCCGCTGCGCGCGTGGGCTACCACAGTGAACTGGGCTACCTGCTGAACCCCAGCTA CGAGCAGCTGCAGAGCTCCAGCCTGGACATGGTCGTGGCCGGTACCCGTGACGCCGTGCTGATGGTGGAATCCGAAGCCGACGAGCTGACCGAAGACCAG ATGCTGGGTGGCGTGCTGTTCGCCCACGAAGAATTCCAGGTGGCCATCGAGGCCATCAGCCAGTTCGCCGCCGAAGCCGGCAAGCCGACCTGGAACTGGC AGGCACCCGCCGAGAACACCGCCCTGGTCGAGGCCGTCAAGGCCGAGGTCGGCGAGGCCGTGTCCCGTGCCTACACCATCACCATCAAGCAGGACCGCTA TGCGGCCCTGGGCGCCCTGCGTGACCAGGCCATCGCCAAGCTGGCCGGCGAGAACGGCCAGTACAGCGAAGCCGAGGTCAAGGAGACCTTCGGTCTGCTG GAATACCGCACCGTGCGCCAGAACATCGTCGACGGCAAGCCGCGTATCGACGGCCGCGACACCCGCACCGTTCGCCCGCTGCAGATCGAAGTCGGCACCC TGAAGAAGACCCACGGTTCGGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCACCGCGACCCTGGGTACCGCCCGCGATGCCCAACTGCTGGACAC CCTGGAAGGCGAGCGTCGTGACAGCTTCATGCTGCACTACAACTTCCCGCCCTTCTCGGTCGGCGAGTGCGGCCGCATGGGCAGCCCGGGCCGTCGCGAG ATCGGTCACGGCCGCCTGGCCCGTCGTGGCATCCAGGCCATGCTGCCGACCCAGGAAGCCTTCCCCTACAGCATCCGCGTGGTCTCCGAGATCACCGAGT CCAACGGCTCCAGCTCCATGGCCTCGGTCTGCGGTGCCTCTCTGGCGCTGATGGACGCCGGTGTGCCGGTCAAGGCCCCGGTTGCCGGTATCGCCATGGG TCTGGTCAAGGAAGGCGAGAAGTTCGCCGTCCTGACCGACATCCTGGGTGACGAAGATCACCTGGGCGACATGGACTTCAAGGTGGCCGGTACCGCCAAG GGCGTTACCGCCCTGCAGATGGACATCAAGATCAACGGCATCACCGAAGAGATCATGGAGATCGCCCTGGAGCAGGCGCTGGAAGCGCGTCTGAATATCC TGGGTCAGATGAACCAGGTGATCTCCGAGTCCCGCGCCGAGCTGTCGGAAAACGCCCCGACCATGCTGGCGATGAAGATCGACCAGGACAAGATCCGCGA CGTGATCGGCAAGGGTGGCGCCACCATCCGCGGTATCTGCGAAGAGACCAAGGCTTCGATCGATATCGAAGACGACGGCACCATCAAGATCTACGGCGAG ACCCGCGAAGCGGCTGAAGCGGCCAAGCAGCGCGTTCTGGGCATCACTGCCGAGGCCGAGATCGGCAAGATCTACGTCGGCAAGGTGGAGCGCATCGTCG ACTTCGGCGCCTTCGTCAACATCCTGCCGGGCAAGGACGGTCTGGTGCACATCTCGCAGATCAGCGATCAGCGCATCGAGAAGGTCACCGACGTCCTCAA GGAAGGTCAGGAAGTGAAGGTGCTGGTGCTGGACGTGGACAACCGCGGTCGCATCAAGCTGTCGATCAAGGACGTGGCGGCGGCGGAAGCCTCCGGCGTC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACGACCCTGCATGAAAAAAACCCGGCCTCGGCCGGGTTTTTTCGTTTCGGGTACGGGTGCCGGGGACCTTTGTATCGCGGCCATGCCGGTGCGCCGTAG CGACTGTTTCTACAGGGGGTGATGCAACTGTCCTATCGCTATAGGAATACACCCGTAGCGGGGAAAACGGCGCAGCCTTTTCCACTTCAGACCTCGTGGC AAGGGCGCGCCCTCACCCCCAACCCTCTCCCGAAGGAGAGGGGGTTATCCGAGCCGGCATTAGCCCCGGCTAGATAGCGATACACCGGCGTGCCTCCCGC TGTAGGAGCGACCCATGGCCGCGATTGGCCCAGGCATTACGCCTTCTCGCGAATCCATTCGATGAAGCTGCGCACCTTGGGCACCTCGGCCATCTGTTCC GGATAGGCCAGCCAGTAGGCGTGGGGGCTGGCCAGGCGGTGGGGCCAGGCGAGCACCAGGCGGCCGGAGGCCAGCTCTTCGGCCACCAGGAATTCCGGCA
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVIKQFKFGEQTFTLETGRIARQATGAVLVSTEDVSVLVTVVGAKQPAVGKDFFPLSVHYQEKTYAAGRIPGGYFKREGRPSEKETLTSRLIDRPIRP LFPEGFLNEVQVVCTVVSTNKKSDPDIAAMIGTSAALAISGIPFAGPIAAARVGYHSELGYLLNPSYEQLQSSSLDMVVAGTRDAVLMVESEADELTEDQ MLGGVLFAHEEFQVAIEAISQFAAEAGKPTWNWQAPAENTALVEAVKAEVGEAVSRAYTITIKQDRYAALGALRDQAIAKLAGENGQYSEAEVKETFGLL EYRTVRQNIVDGKPRIDGRDTRTVRPLQIEVGTLKKTHGSALFTRGETQALVTATLGTARDAQLLDTLEGERRDSFMLHYNFPPFSVGECGRMGSPGRRE IGHGRLARRGIQAMLPTQEAFPYSIRVVSEITESNGSSSMASVCGASLALMDAGVPVKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTAK GVTALQMDIKINGITEEIMEIALEQALEARLNILGQMNQVISESRAELSENAPTMLAMKIDQDKIRDVIGKGGATIRGICEETKASIDIEDDGTIKIYGE TREAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDQRIEKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site