Pseudomonas putida S13.1.2, N805_RS28375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGAATACCCACCATTCACTCACAAAGTACGCACAAGTTATCCACAGGCGCTCGCCTTGCAAAGCCCCCAATACCGCATTATCTTGTATCCCGAACGCAGC GAACCACTACATATAGGGGTTCGTGCAAAATCACACACAAAAGTCAACCCGCAAAATCAAGCGATTTTCCGAGCTGAACTTCAGGTGATTTCAGCAGCCA AACCGCTCCTGCGGAGGCGACCGAGGCAAGCCCTTCCAGGGCCTTGTTCGGGTATGGGTGTTGCAGGCCAGGCCTGGCATCCATCAGCAACAGTTTTTGG GCCCCGCCCAAAACCTTTGACTTCGGCCAGGGAGCGGCAAGCTATTGCCCCTTATTCCTGAGTCTGTCCCGAAGTCGGTACGCCCGTGCGGGCGGATGCG TATGCATTGCGCATCCCCGCCGGGCCATCGAGCAAGTGGACGGAACGGTGGGCGCCCAAAAGGCGCCTGAACAATATAGAAACTGTGGAGACACCCACCC
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| DNA Sequence for Gene |
>N805_RS28375
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGCCAAGGTGCCGCAGGCCGCCGATTCCAACCAGGATCTGGCCGCCACTGCCCCTGGCCAACTGCGCG TGATCAAGCGTAACGGCACTGTCGTCCCCTACACCGACGACAAGATCACCGTTGCCATCACCAAGGCGTTCCTTGCAGTTGAAGGCGGCACCGCCGCCGC TTCGTCGCGCATCCACGACACCGTCGCGCGTCTGACCGAACAGGTTACCGCCACGTTCAAACGTCGCATGCCATCGGGTGGCACCATCCACATCGAAGAA ATCCAGGACCAGGTAGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAAGTTGCCCGCGACTACGTGATCTACCGCGACCAGCGCGCCAAGCAGCGTGCCA CCCGCGCCAACACCGACGCCGTGGTCGAGCCGCACCCGAGCATCCGCATCACCCTGGCTGACGGCAGCCTGGCGCCGCTCGACATGGCCCGCCTGAACAC CATCATCAGCGAAGCCTGCGAAGGCCTGGCTGAAGTCGATGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTGTACGACGGCGTGGCCATCAAGGAC GTCAACACCGCCCTGGTGATGACCGCCCGTACCCTGGTCGAGCGCGAGCCGAACTACTCGTTCGTGACCGCCCGCCTGCTGATGGACACCCTGCGTGCCG AAGGCCTGGGCTTCCTCAGCGTTGCCGACAGCGCCACCCACCACGAGATGGCTGACCTGTACGCCAAGGCCCTGCCGGCCTACATCGCCAAAGGTATCGA GTTCGAGCTGCTGAACCCGGCCCTGGCCGACTTCGACCTGGAAAAACTGGGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTCACCTACCTGGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGATGGCGTGCGCTTCGAGCTGCCGCAGGTGTTCTTCATGCGTGTGGCCATGGGCCTGGCGCTGGAAG AGAAAGACAAGGAAGCCCGTGCGATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCG CCCGCAGCTGTCCAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACCACGCGATCCACGACAACGCCATGCTGTCGAAATTCGCCGGT GGCCTGGGCAACGACTGGACCCCTGTGCGTGCACTGGGCTCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTCGTACCGTTCCTGAAAGTGGTCA ACGACACTGCCGTTGCCGTCAACCAGGGTGGCAAGCGCAAGGGCGCCGTCTGTGCCTACCTGGAAACCTGGCACCTGGACATCGAAGAATTCATCGAGCT GCGCAAGAACACCGGTGATGACCGCCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGTGTCTTCGATGACGGCAAG TGGACCCTGTTCTCGCCTTCGGAAGTGCCAGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACA ACAAGATCAAGGTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAGATGCTGTCGATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGTTCGCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAGATCGCG GTCTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGACGGCAAGCTGGACACGGTTAAGCTGCAACGCACCGTGAACACCGCCGTGCGCATGC TCGACAACGTGATCGACATCAACTACTACTCGGTGCCGCAGGCGCGTAACTCGAACCTCAAGCACCGCCCGGTCGGCCTGGGCATCATGGGCTTCCAGGA CGCACTGTACCTGCAGCACATCGCCTACGGCTCCGACGCTGCCGTCGAGTTCGCCGACAAGTCGATGGAAGCGGTCAGCTACTACGCGATCCAGGCGTCT TGCGACCTGGCCGACGAGCGTGGCGCCTACGAGACCTTCCAGGGTTCGCTGTGGTCCAAAGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCGAGG CCCGTGGCCAGAAGTACATCGACGTCGACCTGAACGAGACCCTGGACTGGGCGCCGGTGCGTGCTCGCGTACAAAAAGGTATTCGTAACTCGAACATCAT GGCCATCGCGCCAACCGCGACCATCGCCAACATCACCGGCGTGTCGCAGTCGATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCGGGC GAGTTCACCGTGATCAACCCGTACCTGGTCCGTGACCTGAAGGCCCGCGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCGG TGCAGCAGATCGAGCGTATCCCGCAAGAGCTGAAAGACCTGTACGCCACCGCGTTCGAAGTCGAGACCAAGTGGATTGTCGACGCAGCTTCCCGTCGCCA GAAGTGGATCGACCAGGCTCAATCGCTGAACCTGTACATCGCAGGCGCCTCGGGCAAGAAGCTGGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTG AAAACCACCTACTACCTCCGTGCCCTGGCTGCGACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTCAACGCCGTTTCCAGCGGCGGCGACAGCG CCCCGGTCCAGGCAGCCGGCCCAGCGCCAGTGCCGAAGGCCTGCGCGATCGACGAGCCGGATTGCGAAGCCTGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCCTTCGCACCGCTGAGGTGAACATGCCGCCTCAACCGCCTTCGGGGGTTGAGGCGGTATTTTTTTGCCTCAAGAAAAGGCCGCGATCGGCCGTTACAC GCACTACCACCGATAGGTGCTGACCGAGATCAAAACACCATATGCTGTGCCGATAAAAAAAAATCACACAAGATATAGGATGAAATCTCATTTACGGCTA GACTCACATCCGTGTTGAAACAACAGGTTTCAGGTGAACGGAAGCACGCAATGCCGGTCGAAAAATTACCTTCGCATGGCCTTTGCGCCGCCCCGATCCA CCCTGAATTCCGGTATACTTCGCCCCCCAAAAAGGGTTGAGCTAATGATCGACTGCGAGACGCAAGCGCCGCTTGCCCAGACCGCACGTTTTATCGTAGC CGTACAGCTTTCAGGCGCCTTGGCCCCTCGCTCGAGGGTAGGACAAGCGCTGACTCGAACAACTTCAAATGTGACGAGAGCCCGCTCTCACTGCCTGCCG
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQAKVPQAADSNQDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDQRAKQRATRANTDAVVEPHPSIRITLADGSLAPLDMARLNTIISEACEGLAEVDGDLIQRETLKNLYDGVAIKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLGFLSVADSATHHEMADLYAKALPAYIAKGIEFELLNPALADFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQVFFMRVAMGLALEEKDKEARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYHAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALTEYNKIKVFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTVKLQRTVNTAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGIMGFQDALYLQHIAYGSDAAVEFADKSMEAVSYYAIQAS CDLADERGAYETFQGSLWSKGILPLDSQQILIEARGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGDSAPVQAAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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