Pseudomonas putida S13.1.2, N805_RS27195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCTGCCCGCTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCCTACTACATCGACTACCGCAACCTGCGTCCGAAGTACGTC GAGGCGTTCTGGAACCTGGTCAACTGGGCCTTCGTTGCCGAACAGTTCGAAGGCAAGACCTTCAAGGCCTGAGTCATCCAGCCTTGATCATAAACCCGGC CATGTGCCGGGTTTTTTTGTGCCTGTGCAAACCTTTTCGCGGGCATGCCCGCGCCCACAGATACGGCGCCACCCGTGACCTTGATGCTCTCCCTGTGGGA GCGGGCGTGCCCGCGAAAAGGCCTGCACGGTTTTGCTTGCTCAGCCCGCATAGCGCGCTAACATCAAAGCTCTGGAAGATTGATACAGCGCACTCAAGTT GCGGGGTCAGGCAACCGATACACTGCTCATGATCGGCCGATAGTGTATCGTCATCGTTGATGGCAAAATGATGCCATGCGCATGGATTAAGGAAACCCCA
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| DNA Sequence for Gene |
>N805_RS27195
TTGAAGCTGGAATTGCGGAACAGCTTGTCGGTCAAGTTGCTCAGGGTCGTGCTGCTGTCGGCGTTGGCGGTTGGCGTCGTGCTCAGCTGTGCGCAAATTG TCTACGACACCTACAAGACCCGCCAGGCCGTGAACAATGATGCGCAGCGCATCCTCGACATGTTCCGCGACCCCTCCACCCAGGCGGTGTACAGCCTCGA CCGCGAAATGGGCATGCAGGTGATGGAAGGCCTGTTCCAGGACGAATCAGTGCGCATGGCGTCCATCGGCCACCCCAACGAAACCATGCTGGCCGAAAAG TCCCGCCCGCTGCGGGACATGTCCATGCGCTGGCTGACCGACCCGATCCTGGGCCAGGAACGCACCTACACCACGCAACTGGTCGGCCGCGGCCCCTACA GCGAATACTACGGCGACCTCAGCATTACCCTCGATACCTCGTCCTACGGCGAAGACTTCCTGATCAATGCGGTGATCATCTTCATTTCCGGCGTACTGCG CGCCTTGGCCATGGGCCTGGTGTTGTACCTGGTCTACCACTGGCTGCTGACCAAACCGCTGTCCAAGATCATCGAGCACCTCACCCAGATCAACCCCGAT CGCCCAAGCCAACACCAGATACCGCTGCTCAAGGGCCACGAGAAGAACGAACTGGGCCTGTGGGTCAACACTGCCAACCAGCTGCTGGCGTCGATCGAGC GCAACACCCACCTGCGCCATGAAGCCGAAAACAGCCTGCAGCGCATGGCCCAGTACGATTTCCTCACCGGCCTGCCCAACCGCCAGCAACTGCAGCAGCA ACTGGACAAGATCCTCGTCGATGGCGGTCGCCTGCAACACCGTGTGGCGGTACTGTGCGTGGGCCTGGACGACTTCAAGGGCATCAACGAGCAGTTCAGC TACCAGGTCGGTGACCAGCTGCTGCTGGCCCTGGCCGACCGCCTGCGCGCCCACAGCGGCCGCCTGGGCGCCCTGGCGCGGCTGGGCGGCGACCAGTTTG CCCTGGTGCAGGCCAATATCGAGCAGCCCTACGAAGCGGCAGAACTGGCGCAGAGCATCCTCGACGACCTGGAAGTGCCATTCGACCTCGACCACCACCA GCAGATCCGCCTGCGCGCTACCATCGGCATTACCCTGTTCCCCGAAGACGGCGACAGCACCGAGAAGCTGCTGCAGAAAGCCGAACAGACCATGACCCTG GCCAAGGCCCGTTCGCGCAACCGCTACCAGTTCTACATCGCCAGCGTCGACAGCGAGATGCGCCGCCGCCGCGAGCTGGAAAAGGACCTGCGCGAAGCCC TGCCGCGCAACCAGCTGTACCTGGTGTACCAACCACAGATCAGCTACCGCGACCACCGCGTGGTCGGCGTCGAGGCGCTGCTGCGCTGGCAGCATCCAGA GCTGGGCATGGTGCCGCCGGACCAGTTCATTCCGCTGGCCGAACAGAACGGCAGCATCATCAGCATCGGCGAATGGGTACTGGACCAGGCTTGCCGGCAA CTGCGCGAATGGCACGACCAAGGTTTCAGCGAGCTGCGCATGGCAGTCAACCTGTCCACCGTGCAGCTGCACCACAGTGAACTGCCACGGGTGGTCAACA ACCTGCTGCAGGCCTACCGCCTGCCGCCACGCAGCCTGGAGCTGGAAGTCACCGAAACCGGCCTGATGGAAGACATCAGCACTGCCGCTCAGCACCTGCT GAGCCTGCGCCGCTCTGGGGCGCTGATTGCCATCGACGACTTCGGCACTGGCTATTCGTCTCTCAGCTACCTGAAATCGCTGCCGCTGGACAAAATCAAG ATCGACAAGAGCTTCGTCCAGGACCTGCTGGACGACGATGACGACGCCACCATCGTTCGCGCCATCATTCAGCTGGGCAAGAGCCTGGGCATGCAGGTGA TCGCCGAAGGTGTGGAAACCGCCGAACAGGAAACCTACATCGTTGCCCAAGGCTGCCACGAGGGCCAGGGCTATCACTACAGCAAGCCGCTGTCGGCCCG TGAGCTGACCAGTTTCCTCAAGCAGGCGCAGCGTAACCAGGTTTCGATGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGATTGGCCCGGTTACAGGCTGTGACCGGCATTTACATGAATTGCGCACCCGCCCCTTTACAGCAAATGCAAATCTTTCGCATGATGTTGCGGTTTCG CGTGCCCCGGCGCACGGTCTACCCCTTGGTCCAACCACACGACGCAGGAAAACCAACAATGATTCGAATGCCTCTGGCCTCCGCCAGTCTGCTGGCCATT GCCATCGCTCTCGCCGGTTGCGGTGAAGGCAAGGACGACAAAGCCGCCGCGCCGCAAGCCCAGGCACCTGCTGCTGCCAGCACCACTGCTGCTGCGCCTG GGGCTGTCGACGAAGCCGCCGGCAAAGCCGTGGTCAAGCACTACGCCGAAATGGTCCATGCCGTGTACAGCGACTCGCTGAGCACCGCCAAGACCCTGCA GACCGCAGTCGATGCGTTCCTGGCCAAGCCCAACGACGAAACCCTGAAAGCCGCCAAGCAAGCCTGGGTCGCCGCGCGCGTACCGTACCTGCAGACCGAG
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| Amino Acid Sequence |
>diguanylate cyclase
MKLELRNSLSVKLLRVVLLSALAVGVVLSCAQIVYDTYKTRQAVNNDAQRILDMFRDPSTQAVYSLDREMGMQVMEGLFQDESVRMASIGHPNETMLAEK SRPLRDMSMRWLTDPILGQERTYTTQLVGRGPYSEYYGDLSITLDTSSYGEDFLINAVIIFISGVLRALAMGLVLYLVYHWLLTKPLSKIIEHLTQINPD RPSQHQIPLLKGHEKNELGLWVNTANQLLASIERNTHLRHEAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCVGLDDFKGINEQFS YQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQSILDDLEVPFDLDHHQQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTL AKARSRNRYQFYIASVDSEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFIPLAEQNGSIISIGEWVLDQACRQ LREWHDQGFSELRMAVNLSTVQLHHSELPRVVNNLLQAYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIK IDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQGYHYSKPLSARELTSFLKQAQRNQVSML
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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