Pseudomonas putida S13.1.2, N805_RS21970
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCTGGGTCAGTGCCAACTATGCAGCGGTCGCCTGCATCGACCTGCCGACCTGTCACGGCCAGTGGTGGCCCGCAGCGGACTTCAGCAATGGCTTCC ACCTGACCCAGCACGTCGGCCCCAATTACCTGGGCGGGCAACTGGACAGTGATGCCCGCACGGCCATCCACATCAGCCACCGCCTGGGCGCGCTACTGGT GACTTGCGTGCTGCTGATGCTGAGCTGGAAGCTGTACCGCTGTGGCCTGCCCGGCCTGGCACGGCTGGTGCTGCTGGCGCTGGCCCTGCAAGTGGGCCTG GGCATCAGCAACGTGGTGTTTCACCTGCCGCTGGCGGTAGCGGTTGCGCACAATGCCGGCGGGGCGCTGTTGCTGCTGAGCATGGTGCTGGTGAACTACC GCATTCGAGTGGTCGACAAGGTTCGGGTGGGTGTCGGCCAAGGCTGGCGCCTGCGGCCGGTAGCCGGCGTGGGCATCTCCCATCACATGAGGAACGACTC
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| DNA Sequence for Gene |
>N805_RS21970
GTGGCGACGCTTCTGAGCGCACGGCGGGCCAGCTGGCGCGATTACCTGGAGCTGACCAAGCCCAAGGTAGTGGTACTGATGCTGATCACCTCGCTGGCGG GCATGTTCCTGGCCACACGGGCGGGGGTCGGCTGGAGTGTGCTGCTGTTCGGCAACCTGGGCATCGGCCTGTGCGCTGGCGCGGCGGCGGTGGTGAACCA TGTGGTGGACCGGCGCATCGATGCACTGATGGCCCGCACCCATAAGCGCCCGCTGGCCCAAGGGCGGGTTGAGCCGCTACCGGCGTTGTTGTTCGCCCTG GCCCTGGCGCTATTGGGTATGGCCCTGCTGCTGGTGTTCACCAACGCCCTCACTGCCTGGCTGACCTTGGCCTCATTGCTCGGTTATGCGGTGCTCTACA CCGGCTTTCTCAAACGCGCCACGCCACAGAACATCGTCATCGGCGGCTTGGCCGGCGCCGCCCCGCCGTTGCTCGGCTGGGTGGCGGTAAGCGGCCATGT CAGCGCCGAACCCTTGCTGCTGGTGCTGATCATCTTCGCCTGGACCCCGCCGCACTTCTGGGCGCTGGCCATCCACCGCAAAGAAGAATACGCCAAGGCC GATATCCCGATGCTGCCGGTGACCCACGGGGAGCGCTACACCAAGCTGCATATCCTGCTGTATACCCTGATACTGCTGGCGGTGAGCCTGCTGCCGTATG CCATCCACATGAGTGGCCCGCTGTACCTGGCCTGTGCCCTGGTGCTGGGCTTGCGCTTCCTGCAATGGGCCTGGGTGTTGTACCGTGGCACCCGGCCGCA CGCGGCGATCGGCACCTTCAAGTACTCTATCGGCTACCTGTTCGCGCTGTTCATCGCGTTGCTCCTCGACCACTACCTGTTGCTGAGCCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGAACCCAGAAAACCGTCTTCATTCTCGTCGCCTTGGTCGCGTTGATCCTGGGCCTGACCGTCAACAAGGTGCTCAATGGCCGCGACCAGCCCAACCC TGCCGAGTTGATCGACGCCGGCATCATCCTGCTGCCGCAGAGCCGCAGCGTGGCCGACGTGACCATGACCAACCAGGACGGGCAGCCGGTGCAGCTGGAT GACCTGAAAGGCAAATGGTCGCTGTTGTTCTTTGGCTACACCTACTGCCCGGACATCTGCCCGACCACCCTGGCGCAGTTGCGTCAGGTGAAGAGCGAGC TGCCCAAGGAAGCCGTCGACCGGCTGCAGGTGGTGCTGGTGAGCGTGGACCCGAACCGCGACACGCCGAACCAGCTGAAGCAGTACCTGGGGTATTTCGA CAAGGATTTTGTCGGCGTGGCGGGGTCGATCGAGGATACCCAGAAGCTGGCCAATGCCTTGAGCATTCCGTTCATTCCGGCGGATACCAGCAAGCCGGGG
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| Amino Acid Sequence |
>protoheme IX farnesyltransferase
MATLLSARRASWRDYLELTKPKVVVLMLITSLAGMFLATRAGVGWSVLLFGNLGIGLCAGAAAVVNHVVDRRIDALMARTHKRPLAQGRVEPLPALLFAL ALALLGMALLLVFTNALTAWLTLASLLGYAVLYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVSGHVSAEPLLLVLIIFAWTPPHFWALAIHRKEEYAKA DIPMLPVTHGERYTKLHILLYTLILLAVSLLPYAIHMSGPLYLACALVLGLRFLQWAWVLYRGTRPHAAIGTFKYSIGYLFALFIALLLDHYLLLSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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