Pseudomonas putida S13.1.2, N805_RS16885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCTGATCGAGGGCGAGTTCACCCGCCTGGACAGCGATCGCGAACTGCAGCACTGGCTGCATGCCGAGCTGAACAAACCGCTGGACCCGGCTGAGGTGG CCCGCGCCGCGCAAACGCCAGAAATGGCCGCCGAGATGTACCTGGCCAGCGTGATGATGGTCGACCAGGAAAACTTCATGGAGCGTTCTTACCTGGACGA ACTGGCCCGCCAGCTGCGTCTGGACCCAGCCCTGCGCCAGGAGCTGGAAAGCCAGGTACGGCTTGCTGCTGGCCAATAACTGGGAGCTGCGTTAGCCCAT CGCCGGCAAGCCAGCTCCCACAGGGTTATCATGATACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCTGTGACATGTCCATCAGCAG CGATGCCTGTTTACCCCTCACTTCACCCGCAAATCTGTAAGGCCTCTGGGCTATACTTCAGCGATTTTTCCCGCTCGTTGTGAATTCCTGAGGGCTGAAT
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| DNA Sequence for Gene |
>N805_RS16885
GTGAAGAACTGGACCTTGCGCCAACGGATCCTGGCAAGTTTCGCCGTGATCATCGCCATCATGCTGCTGATGATCGTGGCCGCCTACTCGCGGTTGGTGG CCATCGAAACCGCCGAGGAGGCAGTGGGGACCGACAGCATTCCCGGGGTCTACTACAGCTCGATGATCCGCAGCGCCTGGGTCGACAGCTACGTCACCAG CCAGCAACTGGTGGGCCTGTCCAACCACCGTGAAATCACGTCGGCCGACATGGAGCTGTTCAAAAGCTTCGAAGACCGGCTCAAGCAACACATGGCCAGC TACCAGTCCACCATCCAGGACAAGGACGACCAGACCCGCTTCGACAACTTCGTGCAGCAGGAAGAGAGCTACATGAAGATCGTCGGTCAGGTGCTGGACA CTTACCGTCAGCACAACTATGCCGAAGCCGAACGGCTGATCATCGAGGTGCTGACGCCGGCCTGGGTAGATGGCCGCAAGCACCTGAATGAAGTGATCGA GCACAATCGGGCGTCTGCCGACTCCGCCACCAACGAGATCGTCAGCGCCGTCAGCACGGCCAAGGGCAGCATGGTGGTATCGCTGCTGCTGGCAATCGTC GCCGCCGGCATCTGCGGCCTGCTGCTGATGCGTGCCATTACCGCTCCCATGCAGCGTATTGTGCATGCCCTCGACAAGCTGCGTTCAGGCGACCTGAGCA TGCGCCTGAGCCTGGACCGCAAGGACGAGTTCGGCGCCATCGAAAGCGGCTTCAACGAAATGGCCGAGGCACTGGCCAACCTGGTGGCCCAGGCCCAGCG CTCGTCGGTGCAGGTGACCACGTCGGTTACCGAAATTGCCGCCACGTCCAAGCAACAGCAGGCCACCGCCACCGAAACGGCCGCCACCACCACCGAAATC GGCGCCACCTCGCGGGAAATCGCCGCCACCTCGCGTGATCTGGTGCGTACCATGACCGAAGTCACCTCCGCCGCTGATCAGGCTTCCAGCCTGGCCGGCT CCGGCCAGCAGGGGCTGGCACGCATGGAGGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAACGCCAAGCTCGGTATCCTCAACGAAAAGGC CAGCAACATCACCCAGATGGTGGTGACCATCGTCAAGGTGGCCGACCAGACCAACCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGCGAG TATGGCCGTGGCTTTGCCGTAGTGGCCACCGAAGTGCGCCGCCTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAGATGGTGCGCGAAATCC AGTCGGCGGTGTCGGCCGGCGTCATGGGCATGGACAAGTTCTCTGAAGAAGTGCGCCGCGGCATGTTCGAGGTGCAGCAGGTGGGCGAGCAGCTCAGCCA GATCATTCATCAGGTGCAGGCCTTGGCGCCGCGCGTACTGATGGTCAACGAAGGCATGCAGGCCCAGGCCACCGGTGCCGAGCAGATCAACCAGGCGCTG GCCCAACTCAGCGATGCCAGTACCCAGACCGTCGAGTCGCTGCGCCAGGCCAGTTTTGCCATCGATGAACTGAGCCAGGTGGCCGCCGGCCTGCGTGGCG GCGTGTCGCGCTTCAAAGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTGCGATGAACGACTTGCCACTGCGCGCCGCACCCGCGCACAACGTCAAGGGCGCGTTGTACCTGCAGTTTCGCCTCAGGGAGCAGCGCTTTGCCCTGAG CGTGCACGAGGTGATCGAGGTGCTGCCGCGCCAGCCGCTCAAGCCGATTGCCCAGGCACCTGCCTGGGTCGCGGGCATCCTCGCCCATCGCGGCCAACTG GTCCCGGTGATCGACCTTGCTGCGCTGAGTTTTGGCCAACCCGCGGCGCAGCGCACCAGTACCCGCCTGGTGCTGGTGCACTACCGTGGCAGCCTGCAGC TTGGCCTGATTCTGGAACAGGCCACCGAAACCCTGCGTTGCCAACCGGACGAATTCCAGCCTTATGGGGTGGATACAGGCCAAGCGCCTTACCTGGGCCC GGTGCGCCAGGATGCTCTGGGCCTGCTGCAGCGCATCGAAGTCAATGACCTGCTGACCGACGCCGTGCACCAATTGCTGTACACGCAAGACCCGACAGGG
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| Amino Acid Sequence |
>chemotaxis protein
MKNWTLRQRILASFAVIIAIMLLMIVAAYSRLVAIETAEEAVGTDSIPGVYYSSMIRSAWVDSYVTSQQLVGLSNHREITSADMELFKSFEDRLKQHMAS YQSTIQDKDDQTRFDNFVQQEESYMKIVGQVLDTYRQHNYAEAERLIIEVLTPAWVDGRKHLNEVIEHNRASADSATNEIVSAVSTAKGSMVVSLLLAIV AAGICGLLLMRAITAPMQRIVHALDKLRSGDLSMRLSLDRKDEFGAIESGFNEMAEALANLVAQAQRSSVQVTTSVTEIAATSKQQQATATETAATTTEI GATSREIAATSRDLVRTMTEVTSAADQASSLAGSGQQGLARMEETMHQVMGAADLVNAKLGILNEKASNITQMVVTIVKVADQTNLLSLNAAIEAEKAGE YGRGFAVVATEVRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMFEVQQVGEQLSQIIHQVQALAPRVLMVNEGMQAQATGAEQINQAL AQLSDASTQTVESLRQASFAIDELSQVAAGLRGGVSRFKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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