Pseudomonas putida S13.1.2, N805_RS09735
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCCACTGTCTGGATGATCGTCAACACCATCGTCGACAGCCAGCGCGTGGCCTCGTTTGGCTCGATCCAGAACTTCGGCGGCTACATTGCCGGCTCCGT GGCGCCGATCGCTACCGGCTTCAGTATCCAGTACTCGGGCTCGTTCACCACGGCGTTCATGATCAGTGCGGTGGTGGCGTTGTGCTCGGCGGTGGCGTAC TTCCTGTTGCTGCAGGCGCCGATTGGCAGTGCCAAGGTCGAAGCAGGGGAGATGGTCCCGGCAACCAAGTAGCCTGGAAACGTCACGTAATCCCTGTAGG AGCGGCCTTGTGTCGCGATGGACCGCAACGCGGTCCCAGGATTCCAGCTTCGCAGCAGAAATTGCCGGGGCTGCTGCGCAGCCCATCGCGACACAAGGCC GCTCCTACACAAAGCGCCAACGGACTGACCCACGGCTCTTGTCAGGCATGGTTATCTGTATGTATAAACAGTGCCTGTTACCGCAACCTGACCTCCGCCC
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| DNA Sequence for Gene |
>N805_RS09735
GTGATCGCCCATTCCGTCGACGACCCGTTCTACTACCTGCATAACTTCCGCCAGGTAGTGCTGTGGGTCGAACAGCGCTACCAGGACCTGCTCGATGGCC AGGAACTGGCCTTCATCCGTGCCTTCAATCAACTGCAAGCGCCAACCCAGGCCTTGATGGTGCGCATGGTCATGCGCAAAGGCGAGCTGTTTCGCAGCGA CCGGCTCGACTACGCCGAAATCGGCGATACGGCGCTGGCGCTGCAGCCTTTGCAGAAACTCGGCTGGGTGCGGGAACCCGAGCAACTGGGCCTGGAACAG CTGTTCGCCTTGCTGCGCAAAGACGAACTGGCCCGCTGCTTCGCCCGGCAACTGAGCCGCCCGCGTGCCGCCAAGCATGAGCTGTTGGCACAGCTGCAAC CGCTGGGGCTGCTGGCCCGGTCACTGGCCGAATGGTTTCCCGACAGCGAGGTGCGCATCCTCCAGTGGTGCCTGCAACCCTTGTGCGACCGCATGCGCCT GTTGTTCTTCGGCAACCTGTACCAGGACTGGTCAGAGTTCGTCCTCGCCGACCTCGGTGTGCTGCGTTACGAGCAGGTGCCATTCAGCACGGGCTCGCGA GCCCTGCAGCAACGTGCCGAAGTCGACCTGGCCATGGCCTTGCACCAGTGCGCCGAGCGGCTGGAGCAGGGCGACGAACCCGTGTCGATTCTGGGTACCC TGCAGGGCCTGCACAGTGACAACCCGTGGCTGGCCCGCCGCCATGCGCGCCTGCAGTTCGCCCTGGGGCAGCAATGCGAGCGCCTGGGGGAGTGGGACCA GGCCATGGCAGTGTACGGCCAGTGCAGCCATGCCCAGGCACGCATTCGCCAGGTGCGGGTGCTTGAGCGCACTGAGCAGTGGCCCCAGGCCCATGCGCTG GCACTACAGCTCGCGGCGGCACCGGCCAACGCGCTGGAAGTGCAGGCACTGGAACGGATGCTGCCACGCCTGGCGCGCAAGCTTGGCGGCCCGCCACAGC GGCGCCAGCGTGCCACGCCGCTGGAGCTGATCGAGCTCGAGCTGCCCCGCGAGCACGCTGCGCTGGGTGTTGAAGAGGCGGTGCGTCAACACCTGGCGCA AGAAGGTGGCCAGGCGCATTACGTGGAGAACACGTTGTTCAACAGCCTGTTTGGCCTGTTGTGCTGGGAGGCGATCTTTGCCCCGGTGCCCGGCGCATTT TTCAACCCGTTCCAGGCTGCGCCACAGGATCTGCACGACAGTGACTTCCAGCAACGGCGCAGCGCGCTGTTCGATCTCTGCCTGGGGCGGCTCGACGATG GCAGCCATCGCCAGGCGATTCTCAACTGCTACAAGGGCAAGCAGGGCCTGCAGTCGCCGTTCGTGTTCTGGTCCATGCTCAGCGAGGAACTGCTGGAACA GGCCTTGGCGTGCTTGCCGGCTGCCCAGCTGAAACAGTGCTTCCTGCGCCTGTTGCAGGATATCCGCAGCAACCGCGCGGGCATGCCTGACCTGATCCAG TTCTGGCCCGAGCAGGGGCGTTACCGCATGGTTGAGGTCAAGGGGCCCGGTGACCGCCTGCAGGACAACCAGCTGCGCTGGCTGGAATTCTGCAGGCAAC ACGGCCTGCCCGTTGCGGTGTGCCATGTGCGTTGGAGCGAAGCGCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTACAGCGTGGCGGTGCGTGCTTTGTGCGAGTTCAGCGCCAAGGTCGGCAACCTGGACCTGCGCTTTACGCCGTCGCCCACCGCCCAGGAGGGCATCGA AGGGCACCAGCGGGTAGTGGCACGGCGGGCTGCGGGCTACGAGTCGGAAATCACCCTTGAAGGCCAGTTCGAAACCCTCAAGGTGCGAGGCCGCGCCGAC GGTTATGACCCTGGCAGCAACCGCCTGGAAGAGATCAAGACGCACCGTGGCGACCTGGCGCGTCAACCGGCCAATCACCGTCAGTTGCACTGGGCGCAGG CCAAGGTTTATGGCTGGCTGATGTGCCAGGCACGACAACTGCCGGCCATCGAGGTGGCGCTGGTATACCTGGACGTGGACAGCGACGACCAGACGCTGTT CAGCGAACACTTTACGGCGGCTGAATTGCAGGCCTTCTTCGAAACCCAGTGCCAGCGCTTTCTAGGTTGGGCTCAACTCCAGCAACGACGCCTGGCCGAA
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| Amino Acid Sequence |
>nuclease
MIAHSVDDPFYYLHNFRQVVLWVEQRYQDLLDGQELAFIRAFNQLQAPTQALMVRMVMRKGELFRSDRLDYAEIGDTALALQPLQKLGWVREPEQLGLEQ LFALLRKDELARCFARQLSRPRAAKHELLAQLQPLGLLARSLAEWFPDSEVRILQWCLQPLCDRMRLLFFGNLYQDWSEFVLADLGVLRYEQVPFSTGSR ALQQRAEVDLAMALHQCAERLEQGDEPVSILGTLQGLHSDNPWLARRHARLQFALGQQCERLGEWDQAMAVYGQCSHAQARIRQVRVLERTEQWPQAHAL ALQLAAAPANALEVQALERMLPRLARKLGGPPQRRQRATPLELIELELPREHAALGVEEAVRQHLAQEGGQAHYVENTLFNSLFGLLCWEAIFAPVPGAF FNPFQAAPQDLHDSDFQQRRSALFDLCLGRLDDGSHRQAILNCYKGKQGLQSPFVFWSMLSEELLEQALACLPAAQLKQCFLRLLQDIRSNRAGMPDLIQ FWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCRQHGLPVAVCHVRWSEAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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