Pseudomonas putida S13.1.2, N805_RS07900
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCCATCAGCATTGGAAAACGCACGAGTGTCCAAATACGGGAGGAAATGATTAAGGTGCCTCAAACACTCATTTCGTCCCCAACCCACGTAAAATCAGGG GATTGGCAGAGGCGCTTTACTGCAGAAGTGTCCGCATTTCATCGGATTCGAACCATGCTTGAGCAAAGCCGAACCTCTGGAGGCCCTGCAGCGCAAGGGC TTTAGGGGCTAGTGGGGTGGAAGTGTCTTTGTATCTCGACGGTCACAGGGGTTGGTGGAATCGGCTGCGTAGGTTAGTGGAAGCAGACAGACGATGAACC GCATCAATGAGCTATACACGATTTAACATAATATGCATTATCCGAACATTCGTATTTCGTCACTGCGCCGTGAGTGCCCAGATGTTGAGCTGCACAAATC CCTGATTCATCGAAACCGGTCCTTCCGTTGATCCAGGTTAAGGTTGGTTCAAGTCGCCTTGGTTAAAATGCGGGCTCCGCACCCTCACGGGGAATCTGGT
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| DNA Sequence for Gene |
>N805_RS07900
ATGACCATCATCGTAACCGGTGCTGCAGGATTCATCGGCAGCAATCTCGTTCAAGCGCTCAACCAGCGCAACGAAACCGACATCATCGCCGTCGACGACC TGACCGATGGCGACAAATTCCGTAACCTGGCCGACAGTGAAATTGCCGATTACCTGGACAAAGACGATTTTCTCGATCGCTTTGCTCGCGGTGAGTTTGG CAAGGTGCGTGCTGTGCTGCACCAAGGCGCGTGTTCAAGCACCGTCGAGGCTGATGGTCGTTTCATGATGGACAACAACTACCGGTTCAGCCGTGAGTTG CTGGCGTCTGCTCAGCAGCAACAGGTCGCGCTTTTATATGCATCATCGGCAGCTGTCTATGGCGCCGGGCAGGATTTTCGCGAACAACGTGAGTGTGAGC GCCCGCTAAACGTCTATGGCTATTCCAAGTTCCTGTTCGATCAACAGGTACGCCGGCAGTTGATGACAGCGCGCAGCCAGGTCGTCGGGTTGCGTTATTT CAACGTGTATGGCCCACATGAACAGCACAAAGGTGCGATGGCGTCAGTCGCCCTGCATTGCTTCAACCAGTATCAGTCCCATGGAAAAGTCAGCCTGTTC GGCAGTTATGGGGACTATCCCAGCGGTGGCCATCTGCGTGATTTCGTTGCGGTGGATGATGTGGTCAAGGTCAACATGTTCTTCCTTGATCACCCACAGT TGAGCGGTATCTTCAATGTCGGTAGCGGGCGCGCCCAGTCGTTTAATGACGTCGCCCTGGCGGTGATCAATCGGCTGCGCGGGTATCAGCATCAACCCCC ATTGTCCTTGGAGATCGCCTTGCTGGAAGGCATTCTGGAATACAGCGAATTCCCTGAGCATTTGCGTGGCAAGTACCAGTGTTACACCTGTGCCGATCTG GAACGCTTGCGCGCTGCAGGCTACGAGGCGGCGACATTGACCGTCGAACAAGGTGTGGGCCTTTACTGTGACAGGTTGCAAGGCACTCAGGCCCCGGCAC TTGACCTAGCCAGGCAGGCGACGGCTGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGCCCTTTTATTCACCTCGCCACCTGCCTGTTTGGTTGCTTCTGAATATAACTACGCTAAATGACTATTTAGTTTAGTTATATTCAGACCGTGCTGAA CATGGCCTGCAAGATCACCATCGGTGGGTATAACTCGCTGTGATTACGGCACCGGGCGCTGGCAAGTGGCTGGTGTTGTTGCTGTTCCGCATCAGCTGGC TATAGAGCGGATAATAGTACCGATTGAACAGGTTCTGTACGCCTACGCTGATCTGATCCCCTTCACTCAGTTGGTACTGGCTGATGACGTCCACCGTGGT GTAACCCTCCACCCTGCGTCTGCCAAAACTCTCTACGCCATTGAGGCGGTAGTCCTCTGCGCCAAAGTAAGTCGCCTGCACGCGGTGGGTCCAGTCTTCG TCAGGTTTGTATTGAAGATAAGCCGTCAGCTTCAGCGGTGGAATACGGTAGCCCGTCATGTCTTGCCAATCGCCTCCGTCCGGTTGCTCGCGCCCTTTCA
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| Amino Acid Sequence |
>ADP-L-glycero-D-manno-heptose-6-epimerase
MTIIVTGAAGFIGSNLVQALNQRNETDIIAVDDLTDGDKFRNLADSEIADYLDKDDFLDRFARGEFGKVRAVLHQGACSSTVEADGRFMMDNNYRFSREL LASAQQQQVALLYASSAAVYGAGQDFREQRECERPLNVYGYSKFLFDQQVRRQLMTARSQVVGLRYFNVYGPHEQHKGAMASVALHCFNQYQSHGKVSLF GSYGDYPSGGHLRDFVAVDDVVKVNMFFLDHPQLSGIFNVGSGRAQSFNDVALAVINRLRGYQHQPPLSLEIALLEGILEYSEFPEHLRGKYQCYTCADL ERLRAAGYEAATLTVEQGVGLYCDRLQGTQAPALDLARQATAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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