Pseudomonas putida S13.1.2, N805_RS07330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S13.1.2, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCATGGTCCAGGGTGCGTGTGTGGCCGGTGGGCTGATGCTGGCCTGGGTGTGCGACCTGATCGTGGCCAGCGATGATGCGTTTTTCCAGGACCCCGTGG TACGTATGGGCATTCCCGGGGTGGAGTATTTTGCCCACCCGTATGAGCTGAACCCGCGCATCGCCAAGGAGTTTCTGTTCACCGGCGATCGCATGAGTGC CGAGCGTGCCTACCAGATGGGCATGGTCAACAGGGTAGTGCCCCGTGAGGAACTGGAGCAGGGCACCTATGCGCTGGCGGCCGGTATTGCCCGGCAGCCG CGAATGGGCCTTGCGCTGACCAAGCAGGCCATTAACCACGTCGAGGATCTGCAGGGTAAACGCACGGCGATGGACGCCGCCTTTGCCTGGCACCACTTCG CCCATGCCCACAACGAACTGCTGTCGGGTGACAAGCTGGGCGGCTTCGATGCCAAGGCCATGGCCCAGGCCAACAAGGCTGCCGCCAGTGGAGAGCAGGC
|
|
| DNA Sequence for Gene |
>N805_RS07330
ATGAGCCGCTGGTTGTGTACGCCACTGACCCAAGCCTTGGGCTGCCGCTACCCGATCGTGCAGACCGCCATGGGTTGGGTTGCAGACGCCAACCTGGTGA TTGCCACAACCCGCGCCGGTGGTTTCGGCTTTCTGGCCGGGGCCACGATTGCGGCCGATGCCCTGGAAGGCGAGATCAACAAGGTAATTGCCGCCACCGG TGGCAGCAATTTCGGCCTGAACTTTCATATGTTCCAGGAAAACGCGGCCCAATGCGTTGACCTGGCGATTCGCTACCGCTTGCGTGCGGTCAGCTATGGG CGTGGCCCGGACAAACAGACCATCGCCCGTTTCAAGGCCGCCGGGGTGTTGTGTATCCCGACGGTGGGCGCACTCAAACACGCCCTGAAGGCGGTGGAGC TGGGCGCGGACATGATCACTATCCAGGGCGGCGAGGGCGGCGGGCATACCGGTGGTGTGCCCAGTTCGATCCTCTTGCCCCAGGTGCTCGCCGCGGTGTC GGTGCCGGTAATCGCCGCAGGCGGTTACTCCACCGGCAGAGGCCTTGCCGGCGCGCTGGCGGCCGGCGCCGTGGGTATTGCCATGGGCACGCGCTTTTTG ATGACCCGGGAGTCGCCTACGCCGTCGAGTACCTTGGTGCATTACCTCGAGGTCAACGACCCGCAACGGGTGCGGGTGACCACGGCGGTAGATGGCATGC GCCACCGCATGATCGAGAACCCGTTTATCAACCGCCTGGAGCAGGCCGGGTCTTTTGGGCGCCTGCGCATCGCGTTGCGCAGCGCCTGGAAATGGAAGCA GCAAACCGGAATGAGCCTGAGCCATCTGTTCGGTGTGCTGCGCCAGGCACTCAAGGAAGACCCTGGCGCGCTGTCGCAAACGGTGATGGCCGCCAACCAG CCGGTGCTGCTGCAGCGTTCGATGATCGACGGTGTTCCGGACGAAGGCATTCTGCCCAGCGGCCAGGTAGCCGCCGCCATTGGCGAACTCAAGAGTTGCC AGCAAGTGATCGAAGAAATTGCCCAGGAAGCCGAAGGCTGCCTGGAAGCCCTGTTGGCTTGCCGTAGCGAGCATCAGCCTGCCGAACTTTGGAGAACACC CTCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCAAGCATTTACCACACAGATCGAGGCGGGCATTGCTGAGCTGGTGCTGGCCAAACCGCCGGTCAATGCCCTGGGCAGCCAGGAGTGGATGGACCTGGC CCATCAGGTCGAAGCCCTGGGCGCCAACCCCGACGTCCGGGTGATCGTCATCCGTGCCGAAGGCCGCGGCTTCTGCGCCGGTGTCGACATCAAGGAGCTG GACGCCCACCCCGAACGCATCGTAGCGGTCAACGCCGGTAATTATGCGGCATTCAAGGCGGTACATCGCAACCCTGTGCCGGTCATCGTCGCCGTGCACG GTTTCGTCCTCGGTGGCGGCGTCGGCATTACCGGTGCAGCCGACATTGTCGTGGCCTCCGAGTGCGCCACCTTTGCCTTGCCTGAAGTAGACCGTGGGGC CATGGGCGGCGGCGCGCACCTGCAGCGTTTGTTCCCGGTGCAGAAGGTTCGTTATCTGTTCTTCACCGGCGACAAGATCGGCGCCGCAGAGGCAGCGCAG
|
|
| Amino Acid Sequence |
>2-nitropropane dioxygenase
MSRWLCTPLTQALGCRYPIVQTAMGWVADANLVIATTRAGGFGFLAGATIAADALEGEINKVIAATGGSNFGLNFHMFQENAAQCVDLAIRYRLRAVSYG RGPDKQTIARFKAAGVLCIPTVGALKHALKAVELGADMITIQGGEGGGHTGGVPSSILLPQVLAAVSVPVIAAGGYSTGRGLAGALAAGAVGIAMGTRFL MTRESPTPSSTLVHYLEVNDPQRVRVTTAVDGMRHRMIENPFINRLEQAGSFGRLRIALRSAWKWKQQTGMSLSHLFGVLRQALKEDPGALSQTVMAANQ PVLLQRSMIDGVPDEGILPSGQVAAAIGELKSCQQVIEEIAQEAEGCLEALLACRSEHQPAELWRTPS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|