Pseudomonas sp. M1, PM1_RS20500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATCCAGGACTTCCAGCGCCTGAACCAGGCCGCGCTGGCCAAGCACGCCGGCGGAACCGTGTACGATAGCGAGCTCGAACTGGAACACGGCCGCTACCTG TACAAGGTCGACATCAAGGACGCCCAGGGGGTGAAGTGGGATGTCGAGCTGGACGCGGTGAGCGGTGAAGTGCTCAAGGACCGCCAGGACCACTGATGAC CTATCCTCTGCGTTACGCGCTGCTCGTCGCGGTCTGCCTGGCCGGGGCGGCGTCGGCCCACGACATCAGCCAGGACGAGGCCCTGCGCCTCACCCGCGAA GGGGTGATCCGCCCCTTCGAGTCGATACTGCCGGCCGCGCTGCAGCGCTACCCCGGCTCGCGCCTGCTCGAGGCGGAGCTGGAGAAGGAGCACGACGCCT ACATCTACGAGATAGAGCTGCTCACCGCCGGCGGCGTGGTCCGCGAACTGGAACTGGATGCCCGTGACGGGCGCATCCTCAAGGATAAGGAAGACGACTG
DNA Sequence for Gene
>PM1_RS20500
ATGCGTCTGCTGCTGGTGGAGGACCACGTCCCCCTCGCCGACGAACTGCTGGCCGGGCTGAGCCGCCAGGGCTACGCCGTGGACTGGCTGGCCGACGGCC GCGACGCCGCGGTGCAGGGGGCCAGCGAGCCCTACGACCTGATCATCCTCGACCTCGGCCTGCCGGGCCGCCCCGGCCTGGACGTGCTGCGCGAATGGCG TGGCCTGGGCCTGGCCACCCCGGTGCTGATCCTCACCGCGCGCGGCTCCTGGGCCGAGCGCATCGACGGGCTGAAGGCCGGCGCCGACGACTACCTGACC AAGCCCTTCCACCCCGAAGAACTCTTCCTGCGCATCCAGGCCCTGCTGCGCCGCGCCCACGGCGTGGCCAACCAGGCCCAGCTGGAGGCCGGCGGCCTGC GCCTGGACGAGGCGCGCCAGTGCGTGCAGCAGGATGGCCGCGAGGTCGACCTGACCTCCGCCGAGTTCCGCCTGCTGCGCTACTTCATGCTCCACCCTGG CCAGCTGCTGTCCAAGTCGCACCTGGCCGAGCACCTCTACGACGGCGAGACCGAGCGCGACTCCAACGTCATCGAGGTGCACATCAACCACCTGCGCCGC AAGCTCGGCCGCGAGATCATCGAGACCCGCCGCGGCCAGGGCTACCGCTTCGCCGGCAGCAGCGGGGGCGCGGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTCGATCCAGCGGCGCCTGGGCTTCGGCCTCGCCGCGGTGCTGCTGGTGATCGGCCTGGCGCTGGCCCAGGCCGGGCTCTGGCTGTTCGACCAGGGCCT GCGCCGCTACCTGGCCAGCGGCCTGCAGGACGAGGCGGAAAGCCTGCTGGTGGCGATCATTCGCGGCCCGGCCGGCCTGCAGCTGGACCCGCAGCGCGTC GACGGCGCCTACGAGCGGCTGTTCTCCGGGCGCTACTTCCAGATCCACTTCGAACAGACCGACTGGCGCTCGCGCTCGCTGTGGGACCACGAGCTGAAGG TGCCGGAGCGCACGGGCCTGCGCGAAGGCCTGGCCAAGGGCCCGGAAGGCCAGCGCCTGCTGGTCTTCCGCGGCGACTACAAGCGTTACGGGCGCAGCCT GCGGATCAGCGTGGCGCAGGACTACACGCCGATCCTCAAGAGCTTCAACCGCCTGCGCAACATTGGCCTGGGCGCCGGGGCGCTGGCGCTGCTGCTGATC
Amino Acid Sequence
>transcriptional regulator
MRLLLVEDHVPLADELLAGLSRQGYAVDWLADGRDAAVQGASEPYDLIILDLGLPGRPGLDVLREWRGLGLATPVLILTARGSWAERIDGLKAGADDYLT KPFHPEELFLRIQALLRRAHGVANQAQLEAGGLRLDEARQCVQQDGREVDLTSAEFRLLRYFMLHPGQLLSKSHLAEHLYDGETERDSNVIEVHINHLRR KLGREIIETRRGQGYRFAGSSGGAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site