Pseudomonas sp. M1, PM1_RS19120 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCTGGAGCGCGGTGCTGCCGATCACCTTCGAGTACGTCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCAGCCCCAGCGAGGTGGTGGTGGTC TCCACCTTCCATATCGAGCTGGACGGCGGCGGCGGCGACCTGCACATCACCGTGCCCTACGCGATGATCGAGCCGATCCGCGAGATGCTCGACGCCGGCT TCCAGTCCGACGTCGACGACCAGGACGAGCGCTGGCAGAACGCCCTGCGCGAGGACATCCTCGACGTCAACGTGCCGGTGGACGCCACCGTGGTGCGCCG CCAGCTGCGCCTGCGCGACATCCTGCACATGCAGCCGGGCGACGTGATCCCGGTGGAGATGCCCGAATTCATGGTGATGCGCGCCAACGGCGTGCCTTCC TTCAAGGTCAAGCTGGGTTCGCACAAGGGCAACCTGGCCTTCCAGATTCTCGATCCGCTCGAGCGCCCGCGCTGAGCGCATCCCCCCAGAGGACCCGACA
DNA Sequence for Gene
>PM1_RS19120 |fliN
ATGGCAGATGAAGACAAAGTGACCCCCGAGGAGCAGGCCCTGGCGGACGAATGGGCCGCGGCCCTGTCCGAGGCGGGCGACGCCAGCCAGGACGACATCG ACGCGATGATGGCCGGCAACGCCGCGCCGGCCGCCCCGGTGGCGCCGCGCGCGCCCATGGAGGAGTTCGGCATGGCGCCGCGGGCGCCGACCATCGCCGG CCTGGAAGGGCCGAACCTGGACGTCATCCTTGACATCCCGGTGACCATCTCCATGGAGGTCGGCCACACCGACATCACCATCCGCAACCTGCTGCAGCTC AACCAGGGCTCGGTGATCGAGCTCGACCGCCTGGCCGGCGAACCGCTGGACGTGCTGGTCAACGGCACCCTGATCGCCCACGGCGAGGTGGTGGTGGTGA ACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCCAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGATGGCCCGCCTGTTCGCGCTGTTCTGCGCCCTGCCGCTGGCGGGGCTGCTGCCCCTGGCCCGGGCCGCCGATGAGCCGGCCACCGCGCCGGCGCCGGC CATCGTCCACGCCAGCGCCTCGCCGAGCCTGATCACCGGCAGCGCCGGGGCCCAGCTGCTGCAGCTGCTGTTCGGCCTGGTGCTGGTGGTGGCGCTGATC TTCCTGCTCGCCTGGCTGGTGCGCCGGGTGCAGCAGATCGGCCCGCGCGGCAACCAGGCGATCAAGCTGGTGGCCAGCCAGGCCCTGAGCCCGCGCGACC GCCTGCTGCTGGTGCAGGTGGGCGAGGAGCAGATTCTCCTCGGCCTGACCCCCGGGCGCATCACCCCGCTGCACGTGCTCAAGGAGCCGGTGCGCGGCGT CGAGGCCGGCGAGCAGCCGGCGCCGCCGGAATTCGCCCAGCGCCTGCTGGAGCTGCTGAACAAGGACAAGGGCCGCCCGCAATGAGCTTCCCCGCCTTCG
Amino Acid Sequence
>flagellar motor switch protein
MADEDKVTPEEQALADEWAAALSEAGDASQDDIDAMMAGNAAPAAPVAPRAPMEEFGMAPRAPTIAGLEGPNLDVILDIPVTISMEVGHTDITIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site