Pseudomonas sp. M1, PM1_RS18755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACAACCTGCGCCGCACCAGCGAACGCACCGCCACCTTCGACCTGCTGCACAAGTACGGGCCGGACTACAAGGTAGTGTTCGTCGGCGACGCGGCCATGGC GCCCTACGAGATCACCCAGGCCGGCGGCAGCGTCGAGCACTGGAACGAGGAAGCCGGCTACGTGTGGATGCAGCGCTTCATGGAGAAGTACAAGAAGCTC ATCTGGATCAACCCGTACCCGAAGGACACCTGGAACTACACCGCCTCCACCAACCTGGTGCGCGAACTGGTGAAGGACCAGATGTACCCGCTGACCCTGC GCGGGCTGGAAGAGGGGATGCGCTTCCTTTCGCGCGGGTGAGCCCGCTCTGCGCCAACCATCGCGCTCCCCTGTAGGAGCGCGCCCTGCGCGCGAATCGC GGGCAGGGCCCGCTCCTGCAATTGCCGCCTTTGCCTTGCCAAATCCCATGCCCGCGACGGTAACATCGCGGGCACGGCGCAGCGCACCGATGGGCAAGAC
DNA Sequence for Gene
>PM1_RS18755
ATGACCGGAACCAGTTTTTCCCGCAACACCTGGCTCAACTCCCTGCACATGACCACCCTGACGGTTTCCCTGCTGGAAGCCGAAGGCCATGAGCGCGACG GCATCCTCGAAGGCAGCGGCATCACCGCCGCCGACCTGGTGGACCTGCGCCGCCTGGTCAGCCCCTGGCAGGAGCAGCAGGTGTTCGCCAACGCCGAGCG CCTGGCCGCCGAGCCCGCCCTGGGCCTGCGCCTGGGCCTGCGCACGCGGATTTCCGCCTACGGCCTGCTGGGCTATGCGCTGCTTTCGGCGCCGACCCTC GGCGAGGCGCTGCGCATCGGCCTGAGCTACCCGGTGCTGCTGGGCACCTACTTCCACCTGTCGCTGCAGGTCGAAGGCGAGGTGGCCTGGCTGGTGGCCA TCGGCTACAGCGAGGACGAGGCCCTGCGGCCGTTCAACACCGAACTGTGCCTGGGCTCGATGAAGGTCACCTGCGGCGACCTGCTGGGCCAGCCGCTGGA GCTGCTGTGCGCGGAGTTCGACTATGCCGGCCCGCCCGAGCGCGAGGCCGCCTACGCCGAAGGCTTCGCCTGCGGCCTGCGCTTCGGCGCCACGCGCAGC GCCTTCGGCTTCCCCGCCGCCTGGCTGGAACGCCGCCTGCCGCTGGCCGACCCGGTGACGCACCGCGAGATGCTCGAACAGTGCCGCCGGCAGAACGTCG ACCTGGCCGCCCGCCGCGCCTGGCTGGACAAGGTCCGCGGCATCCTCGGCGAGCGCCTGCAGGCGCCGCCGGGCCTGGAGGAACTGGCGCGGCGCCTGAA CTGCTCCTCGCGCAGCCTGCGCCGTCACCTGCAGCAACAGCAGACCAGCTACCAGCAACTGCTCGACGAACTGCGCTTCGCCCGCGCCAAGGAACTGCTG CAGGGCGGCGACATGCCCATCTACCGCATCGCCGAGGAGCTCGGCTTCAGCGAAACCGCCAGCCTGCGCCACGCCTTCCAGCGCTGGAGCGGCCAGCCGC CGAGCCATTTCCGCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCGTAGGGAGCATAACGCCTACGGCGTTATCCGCCGTTTGACCTTGGTTACCGGCTCGCTCGGTGTCGAGCTTGGCGTGGGTCACGCATTCCCCCGG ATCGACCGAGGCAGGGTCGATGAGAAAGGTGAGGCGGCGGATAACCGCGAACGGTTATACGCCCTACGCAGCCCCACCCGCGCCATTCCCATGGGAGCGC GCCCTGCGCGCGAATCGCGGGCAGGGCCCGCTCCTACAGGAGGCACGGTGCCGAGAATGGCGTAGGAGCGGATCTTATCCGCGAATCGCGCCGGTGCGTC CGGCTATCGCGGACAAGGTCCGCTCCTACGACCGTGCTACCTGAAACTGTAGGAACTCCGTCCGCGATTATCCGCACCTACCGCTCAGGGCCGCGCCTCC AGGATCAGGTTGAACGGCGTCTCCGCCGCCCGGCGGAAGCGGGTGAACCCGGCTTCCTCGAACACCGCGCGCAGCCGCGCCTCGCCCGCCTGGGCGCCCA
Amino Acid Sequence
>transcriptional regulator
MTGTSFSRNTWLNSLHMTTLTVSLLEAEGHERDGILEGSGITAADLVDLRRLVSPWQEQQVFANAERLAAEPALGLRLGLRTRISAYGLLGYALLSAPTL GEALRIGLSYPVLLGTYFHLSLQVEGEVAWLVAIGYSEDEALRPFNTELCLGSMKVTCGDLLGQPLELLCAEFDYAGPPEREAAYAEGFACGLRFGATRS AFGFPAAWLERRLPLADPVTHREMLEQCRRQNVDLAARRAWLDKVRGILGERLQAPPGLEELARRLNCSSRSLRRHLQQQQTSYQQLLDELRFARAKELL QGGDMPIYRIAEELGFSETASLRHAFQRWSGQPPSHFRA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site