Pseudomonas sp. M1, PM1_RS15700 (hscA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGCCAGCGTTACCGTGAGCTGGTCCGCAGTGTCCACCCGGACCGTTTCGCCGATGCTTCCGAGCGCGAGCAGCGCGTGGCGCTGGAACGCGCCGCCGA GCTGAACGACGCCTACCAGACGCTGAAGAGCGCGCCGCGCCGGGCGCTGTACCTGCTGTCCCTGCGTGGCCAGGCGCTGCCGCTGGAAGCGACGGTGCAG GACCCGGAGTTCCTTCTGCAGCAGATGCAGCTGCGCGAAGAGCTGGAAGACCTGCAGGACAGCGCCGACCTGGATGGCGTAGCCGCCTTCAAGCGCCGCC TGAAGACCGCCCAGCAGCAGCTGGAGGACAGCTTCGCCGATTGCTGGGACGACGCCGCGCGCCGCGAGCAAGCCGAGCGCCTGGTGCGCCGCATGCAGTT TCTCGACAAGCTGGCGCAGGAAGTGCGCCAGCTCGAAGAGCGACTCGACGATTAATCCGCGCGGCCCGTGCCGCGCCCGTTACGCCTGATTAGAAGCCGC
DNA Sequence for Gene
>PM1_RS15700 |hscA
ATGGTCCTATTGCAGATCGCCGAGCCCGGACAAACCCCTCAGCCGCACCAGCGCCGGCTGGCCGTGGGCATCGACCTGGGCACCACCAATTCCCTGGTCG CCGCCGTGCGCAGCGGCGTCGCCGCACCCCTGGCCGATGCCGAGGGGCGCCTGATCCTGCCGTCGGCGGTGCGCTACCTGGCCGACCGCGTCGAGGTCGG CGAGTCGGTCAGGCGCGGCGCCTCCGCCGACCCGCTGAACTCCATCATCTCGGTCAAGCGCCTGATGGGCCGTGGCCTGGAGGATGTGAAGCAGCTCGGT GGCCAGTTGCCCTACCGCTTCACCCAGGGCGAGTCGCACATGCCCTTCATCGAGACCGTGCAGGGCCCGAAAAGCCCGGTCGAGGTCTCCGCGGAAATCC TCCGCAGCCTGCGCCAGCGCGCCGAAGCCACCTTGGGTGGCGAACTGGTCGGCGCGGTGATCACGGTGCCGGCGTATTTCGACGACGCCCAGCGCCAGGC CACCAAGGACGCCGCGCGCCTGGCCGGCCTGCACGTGCTGCGCCTGCTCAACGAGCCCACCGCCGCGGCGGTCGCCTACGGCCTGGACAAGAACGCCGAG GGCGTGGTGGCCATCTATGACCTGGGCGGCGGCACCTTCGACATTTCCATCCTGCGCCTGACCCGCGGCGTCTTCGAGGTCCTGGCCACCGGTGGCGACA GCGCCCTGGGCGGCGACGACTTCGACCATGCCATCGCCGGCTGGATCATCCAGCAGGCCGGCGTTTCCGACGACCTCGACCCGGGCAGCCAGCGCCAACT GCTGCAGGCCGCCTGCGCGGCGAAGGAAGCCCTGACCCTCAACGAAAGCGTCGAAGTCGCCTATGGCGACTGGCGCGGCAGGCTGGACCGCAGCCAGCTG GATGCCCTGATCGAACCCTTCGTTGCCCGCAGCCTCAAGGCCTGCCGTCGCGCCGTGCGTGATTCCGGCATCGAGCTGGAAGACATCGGCGCGGTGGTCA TGGTCGGCGGCTCCACCCGCGTGCCGCGTGTGCGCCAGGCGGTGGGTGAGCTGTTCGGCCGCGAACCGCTGGTGGACATCGACCCCGACCAGGTGGTGGC CATCGGCGCCGCCATCCAGGCCGATGCCCTGGCCGGCAACAAGCGCGGCGAAGAGCTGCTGCTGCTGGACGTCATCCCGCTGTCCCTGGGCCTCGAGACC ATGGGCGGGCTGATGGAGAAGGTGATCCCGCGCAACACCACCATCCCGGTGGCCCGCGCCCAGGAGTTCACCACCTACAAGGATGGCCAGACGGCCATGA TGATCCACGTGCTGCAGGGCGAGCGCGAGCTGGTCAAGGACTGCCGTTCCCTGGCGCGCTTCGAGCTGCGCGGCATCCCGCCGATGGTGGCCGGCGCGGC GAAGATCCGCGTCAGCTTCCAGGTGGACGCCGACGGCCTGCTGGCGGTGTCCGCCCGCGAGATGAGTTCCGGCGTCGAGGCGAGCATCCAGGTCAAGCCG TCCTACGGCCTGACCGACGGCGAGATCGCCCGCATGCTGCAGGACTCCTTCCAGTACGCCGGCGACGACATGAACGCCCGCGCGCTGCGCGAGCAGCAGG TCGAGGCCCAGCGCCTGCTCGAGGCCGTGCGCTCGGCGCTGGACGCCGATGGCGAGCGCCTGCTGGACGCCGACGAGCGGCTGGCCATCGAAGCCAGCAT GGATACTCTGCGCGAACTGGCCGCCGGTAGCGATACCGCCGCCATCGAGCAACAGATCAAGCGTCTGTCCCAGGTGACCGACGCCTTCGCCGCGCGACGG ATGGACGCTTCCGTCAAGGCCGCCCTGGCCGGTCGCCGGCTCAACGAAATCGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGAAGATGCCGCAGATCGTATTTCTGCCCCACCCCGAGCATTGCCCGGAGGGCGCGGTGGTCGAGGCCCAGCCGGGCGAGACCATCCTCAAGGCTGCGC TGCGCAACGGCATCGATATCGAGCACGCCTGCGAGATGTCCTGCGCCTGCACCACCTGTCACGTGATCGTGCGCGAGGGCTTCAACTCCATGGAGCCGTC CGACGAGCTGGAAGACGACATGCTGGACAAGGCCTGGGGCCTGGAGCCGGATTCGCGCCTGTCGTGCCAGGCGGTGGTGGCGGACGAGGACCTGGTGGTG GAGATTCCGAAATACACCATCAACCAGGTTTCCGAAGGTCATTGAGGGAGCGGACATGAGCCTGAAATGGACCGATGTGCTGGAAATCGCCATCCAGCTG GCCGATAGCCATCCCGACGTGGACCCGCGCTACGTCAACTTCGTCGACCTGCACAACTGGGTGGTCGGCCTGCCGGAATTCAGCGACGACCCGTCGCGCG
Amino Acid Sequence
>chaperone protein HscA
MVLLQIAEPGQTPQPHQRRLAVGIDLGTTNSLVAAVRSGVAAPLADAEGRLILPSAVRYLADRVEVGESVRRGASADPLNSIISVKRLMGRGLEDVKQLG GQLPYRFTQGESHMPFIETVQGPKSPVEVSAEILRSLRQRAEATLGGELVGAVITVPAYFDDAQRQATKDAARLAGLHVLRLLNEPTAAAVAYGLDKNAE GVVAIYDLGGGTFDISILRLTRGVFEVLATGGDSALGGDDFDHAIAGWIIQQAGVSDDLDPGSQRQLLQAACAAKEALTLNESVEVAYGDWRGRLDRSQL DALIEPFVARSLKACRRAVRDSGIELEDIGAVVMVGGSTRVPRVRQAVGELFGREPLVDIDPDQVVAIGAAIQADALAGNKRGEELLLLDVIPLSLGLET MGGLMEKVIPRNTTIPVARAQEFTTYKDGQTAMMIHVLQGERELVKDCRSLARFELRGIPPMVAGAAKIRVSFQVDADGLLAVSAREMSSGVEASIQVKP SYGLTDGEIARMLQDSFQYAGDDMNARALREQQVEAQRLLEAVRSALDADGERLLDADERLAIEASMDTLRELAAGSDTAAIEQQIKRLSQVTDAFAARR MDASVKAALAGRRLNEIEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site