Pseudomonas sp. M1, PM1_RS14385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCCCACCAGGTCGCCAGGCTGTCGGCGTTGAGCGCCAGGCGCAGGCGCTCGGGCGAGCCGCCTTCATCCAGCGCCGGCACCCACTGCTGCAGGTCGCC CTCCAGCAGGCGCACCTGCTGCACGTGGTTGAGCAGGCGGCGGCCCAGCTCAGTGGGCTGCGGCCGCGCCGCGCGCACCAGCACCGGCTGGCCGACGCGC GCTTCGAGCAGCTTGATGCGCTGCGAGATCGCCGACTGCGACAGGCCCAGGGCCTGGGCGCCGCGTTCGAAACCGCCCTGCTCCACCACCGCGGCCAGGG CGGCCAGCAATTTGTAGTCGAACATCAGTTTTCCTAATGAGTCATCAACAGGATTCGTTTTCCTTATACAGGCACAAGCCCCAGACTCGCCAGGCATTCC CCCTCGAACCCGCCCACCGGAGCCCGACCATGCCTGGCCTGACCCTCTCCGTTTCCTCGCTGCCCCGCCAGTGCTCCAACTGCCAAGGGAGAGCCTGAAC
DNA Sequence for Gene
>PM1_RS14385
ATGTGGCAGAGCTACCTCAACGGCCTGCTGGTGGCCGCCGGCCTGATCATTGCCATCGGCGCGCAGAACGCCTTCGTCCTGGCCCAGAGCCTGCGCCGCG AGCATCACCTGTCGGTGGCCGCGCTCTGCGTGCTGTGCGACGCCGTGCTGGTCAGCGCCGGGGTGTTCGGCCTGGCCAAGGTGCTGGCGGAGAACCCCAC GCTGCTGGCCGTGGCCCGTTGGGGCGGGGTGATCTTCCTGACCTGGTACGGCGCCAAGGCGCTGCGCCGCGCCATCGCCCCGCAGGCCATGGCCGACGCC GGGCAGACCGGCCCGCGCTCGCGCCGCGCGGTGCTGATGGCGGCGCTGGCGGTGACGCTGCTCAACCCCCACGTGTACCTGGACACCGTGCTGCTGATCG GCTCCCTCGGCGCCCAGCAGGCCGCGCCCGGCGCCTATGCCATGGGCGCGGCCAGCGCCTCGCTGCTGTGGTTCTTCACCCTGGCCCTGGGCGCCGCCTG GCTCGCGCCCTGGCTGGCGCGCCCGGCCACCTGGCGGCTGGTCGACCTGATGGTGGCGGTGATGATGCTCGGCATGGCCAGCCAACTGGTGTTCGCCGCC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCGACGACGAAACAGATCGAACCCCGAAGCCTCGCGGCAGTCGACCCCAGTGCGCGGGAACGCCCCGCATCGGCACTGGCGCGCGGCTTTGCCCCTAC AGTTGCTGCGTGGATATGCCGGGGGGCGGGTGCTATGATCCGAGGTTCGCGGCGCCAGCCTGCCAGGCCTGCTGGACGCACCCGACGCGCGCCTCGCTCT GCGGAGCAGGGGCGCTACGTACGGATGCCGCGACAATCACGAACCGGCCCCGTGTACCGGTCGCGCGTTCGCCGCGCTAGCCCTGACCTGAGGAAATAGG AGAAACACCATGGCTTTCGAATTGCCGCCGCTGCCTTACGCCAAGAACGCCCTTGAGCCGCACATTTCCGCGGAAACCCTCGAATACCACCACGACAAGC ACCACAACACCTACGTCGTGAACCTGAACAACCTGATCCCGGGCACCGAGTTCGAAGGCAAGAGCCTGGAAGACATCGTCAAGACCTCTTCGGGCGGCAT
Amino Acid Sequence
>amino acid transporter LysE
MWQSYLNGLLVAAGLIIAIGAQNAFVLAQSLRREHHLSVAALCVLCDAVLVSAGVFGLAKVLAENPTLLAVARWGGVIFLTWYGAKALRRAIAPQAMADA GQTGPRSRRAVLMAALAVTLLNPHVYLDTVLLIGSLGAQQAAPGAYAMGAASASLLWFFTLALGAAWLAPWLARPATWRLVDLMVAVMMLGMASQLVFAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site