Pseudomonas sp. M1, PM1_RS13635

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGTGGTGGGCTGCATCATCGCCACCCGCCTGATCAACGTCATCGGCCGGCGCAGCATGCTGATCTACAGCTTCCTCTGGTCCGGCCTGGCGCTGCTCGG CCTCGGCGCCTTCCACGCCTCCTCCGAAGCCGTGATCCTCGCGCTGTTCGGCGCCTACGCCCTGTTCATCGGCGGCGCCCAGGTGCTGCAACTGGTCTAC CCGAACGAGCTGTTCCCCACCGAGATCCGCGCCTGCGCGGTCGGCGTGGGCACCTCGCTGTCGCGGGTCGGCGCCGCGGTCGGCACCTACCTCGTCCCCC TGTCCCTGGACAGCCTGGGCATCGCCCAGACCATGTACGCCGCGGCCATCGTCACCCTGGTCGGCCTGCTGTTCGCCTGGGCGCTGGCCCCGGAAACCCG CTCGCTCAACCTGCAGCAGGCGGCTTCGCTCACCTGATCAAGGGCCGCCGCGCCGCTGGGCGCGGCGGCCGACCACCACGACCCCACTGGAGAACGCATC
DNA Sequence for Gene
>PM1_RS13635
ATGCAATTCGAAGGCATCTACACCCCCGCCATCACCCCCCTGGCGGCCGACGGCCAGATCGACCATCCGGCCTTCGCCGAAGTGCTGGAATACCTGATCG CCTCGAAGGTCCACGGCATCATCATCGGCGGCTCCACCGGCGAGTACTACGCCCACACCGCCCAGGAGCGCTTCGACCTGGCGGCCAAGGCCAAGGACGT GATCAACGGCCGCCTGCCGCTGATCGTCGGCACCGGCGCCATCCGCACCGAGGACTCGGTGGCCTACGCCAAGGCGGCGAAAGAGATCAAGGCCGACGCC CTGCTGGTCGGCTCGCCGCCCTATGCCCTGCCCACCCAGCAGGAGATCGCCGACCACGTGCTGGCCGTCGACGCCGCCGCCGACCTGCCGATCATGCTGT ACAACTACCCGGCGCGCATGGGCGTGGACATGGGCGAGGAATTCTTCGCCGCCGTCGCCGGCTGCAAGAACATCGTCGCCATCAAGGAAAGCTCCGGCTC CACCGGCCAGCTGCACCGCCTGGCCTGCAAGCACCCGCGCATCGCGCTGTCCTGCGGCTGGGACGACCAGGCCCTGGAATTCTTCGCCTGGGGCGCGCGC AGCTGGGTCTGCGCCGGTTCCAACTTCATCCCCGGCGAGCACGTCGCCCTGTACCAGGCCTGCGTGGTCGAGAACGACTTCGCCAAGGGCCGCCGCATCA TGGCGGCGATGATGCCGCTGATGGACTTCCTGGAAGGCGGCAAGTTCGTCCAGTCGATCAAGTACGGCTGCGAGCTGGCCGGCCTGCGCAGCGGCGGCGT GCGCGCCCCGCTCAAGGGCCTGACCGAGGCCGAAAAGGCCGAACTGAAAGAGATCGTCGCCGTACTCAAGCGCGAAGTCGCGCAGATCACCGAGGGCACC CACAATGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATTGCTGAGCAAGGCGCAATACGCCGCCATCGCCGCCGAACTGCGCTTCCCCACCCAGGCCTTCATCGACGGCGGCTTCCGTGACGCTGTCTCCGGCCGC ACCTTCGCCAGCAGCAACCCGGCCACCGGCGAGCTGCTAGCCAACATCGCCGCCTGCGACGCCGAAGACGTCAACCTGGCCGTGGCCAGCGCCCGCCTGG CCTTCGAAGACGGCCGCTGGAGCAAGCGCTCCCCCGGCGAGCGCAAGGCGGTCATGCAGCGCTTCGCCCAGCTGCTCGAAGACCACGCCCACGAACTGGC GGTGATGGAGAGCCTGGACAGCGGCAAGCCGGTGCGCGAATGCCAGAACATCGACGTGCCGGAGACCATCCACACCCTGCGCTGGCACGCCGAGCTGATC GACAAGATCTACGACAGCACCGCGCCGGTCGGCTCCGGCGCCGTGACCATGGTGGTGCGCGAGCCCATCGGCGTGGTCGGCCTGGTGCTGCCGTGGAACT
Amino Acid Sequence
>dihydrodipicolinate synthase
MQFEGIYTPAITPLAADGQIDHPAFAEVLEYLIASKVHGIIIGGSTGEYYAHTAQERFDLAAKAKDVINGRLPLIVGTGAIRTEDSVAYAKAAKEIKADA LLVGSPPYALPTQQEIADHVLAVDAAADLPIMLYNYPARMGVDMGEEFFAAVAGCKNIVAIKESSGSTGQLHRLACKHPRIALSCGWDDQALEFFAWGAR SWVCAGSNFIPGEHVALYQACVVENDFAKGRRIMAAMMPLMDFLEGGKFVQSIKYGCELAGLRSGGVRAPLKGLTEAEKAELKEIVAVLKREVAQITEGT HNG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site