Pseudomonas sp. M1, PM1_RS08865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTCCATTGATTCATAAGGCTTTAACGTTTTGGCACGCACCTTGCTGAAGTGCTGGCAAGCCCACACCGGCAAACAGGTTCGTGACCATGAGCATCAGCT TCGACTCCGCCCTCGGCATCCACGCACAAGCGCTCAGCTTCCGCTCGCAGCGCGCTGAAGTGTTGGCCAACAACCTGGCCAACGCCGACACCCCCAACTA CAAGGCGCGCGACCTGGACTTCGCTTCCGTGCTCGCGGCCCAGGCCGACAAGGCCAAGAGCGGCACCTTCAGCACCGCCGTCACCAACGCCCGGCACATC GAGGCCGACGGCGTGGCCATGGGCGACGACTCGCTGAAATACCGCATCCCGACCAACCCCTCCATCGACCAGAACACCGTCGACGAGCAGGTCGAGCAGG CCAACTACGCGCAGAACGCAGTGCAGTTCCAGGCCAGCTTCACCTTCCTCAACAGCAAGTTCAAAGGCCTGATGGGCGCCCTGCGCGGAGAGTGATAGCC
DNA Sequence for Gene
>PM1_RS08865
ATGTCCCTTGCCAGTGTCTTCAACATCGCCGGTAGCGGCATGAGTGCCCAGACCACCCGTCTGAACACCACCGCCTCGAACATCGCCAACGCCGAGAGCG TGTCCTCGAGCATCGACCAGACCTACCGCGCCCGCCACCCGGTGTTCTCCGCCATGTTCCAGCAGGCGCAGAGCGGTCAGGGCTCGCTGTTCCAGGACAC CGACCAGGCCGGCACCGGCGTGCAGGTGCTGGGCGTGGTCGAGGACCAGAGCCCGCTGGTGCCGCGCTACGAGCCGAACCATCCGGCCGCCGACGCCAAC GGCTACGTGTACTACCCCAACGTCAACGTGGTGGAGGAGATGGCCGACATGATGTCCGCCAGCCGCTCCTTCCAGAGCAACGCGGAAATGATGAACACCG CCAAGCAGATGATGCAGAAGGTCCTGACCCTGGGTCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGCAGAGGACGCCCCATGAGCATCGACAACACCAGTAGCACTTCGAACTCGGTCCTCTCGTCGCTGAACGCCGGGTCGAGTTCCTCGTCTTCCACCTCG GAAACCGGCACCAGTGCGCTGGGCAAGGATTCGTTCCTGCAACTGCTGGTCACCCAGCTGAACAACCAGAACCCGCTGGACCCGCAGGACAACACCCAGT TCGTCTCCCAGCTCGCCCAGTTCAGCAGCCTGGAGAGCATGGAGAACCTGGATACCACACTGGGCAACTTCTATTCCTCGTTCCAGTCGTCCCAGGCGCT GCAGGCCTCGTCCCTGGTCGGCCGCTCGGTGATCGTCAACTCCAGCAAGGTCCAGGTCGACGACCCCAGCGCCGGCGTGCAGGGCTCGCTGGTGATGCCG TCCAACGGCGATGGCGTGACCCTGAAAATCTATGACGACGACGGCGAGCTGGTGCGCACCATCGACATGGGCAGCCAGAAGAGCGGCAACATCGACTTCA
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLASVFNIAGSGMSAQTTRLNTTASNIANAESVSSSIDQTYRARHPVFSAMFQQAQSGQGSLFQDTDQAGTGVQVLGVVEDQSPLVPRYEPNHPAADAN GYVYYPNVNVVEEMADMMSASRSFQSNAEMMNTAKQMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site