Pseudomonas sp. M1, PM1_RS05870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCTGCGGGTGGCCCTGGACAGCAGCGGCGAAGCCCTGCGCCAGGGGCTGGCGGCCAGGCCCTGGCTGGTCAAGCCGAACGCCGAGGAACTGGCCGAGG CCTGCGGCCCGGCGGGCGAGGGCGGCGCCGATGCCCAGGCCCGCGCCCTGCGCGCTGGCGGCATCGAGCACCTGGTGCTCTCCGAGGGCGCCGAGGGCGT GCGCTGGTACGGCCCGGACGGGCTGTGGCAGGCGACGCCGCCGAAGGTCGAGGTGGCCAGCACCGTGGGCGCCGGCGACTCGCTGCTGGCGGCCATGGTC GACGGCCTGCTCGCCGGCCGGCCCGCCGCGCAGGTGCTGCGCCAGGCCACCGCGGTGGCCGCCCTGGCCGTGACCCAGTTCGACTTCGGCATCGCCGACC GCGAGCGCCTGGCCCGCCTGCAGGCGCAGGTGGCGGTGCGCGCGCTGGATTGATCCGCCCGCCCGCAGCGCCGGGCGGAGCCATGACAAGAGGTACGACG
DNA Sequence for Gene
>PM1_RS05870
ATGAACCTTGCCCTGATCACCGCCTGCCCCAACGGCCAGGTCACCAGCCTGCTCAGCGCGCGCTTGCTGCGCGCCGCCGCCGAACGCCTGGGCTGGTCGG TGTGCGTCGAGAGCAACGAGCCGCAGCGCCCCGAGCAGCGCCTGAGCGCCGAACAGATCGGCTCGGCCGACCTGGTGCTGGTGGTCAGCAGCCAGCCGCT GGACTTGTCCCGCTTCGCCGGCAAGCCGCTGTTCCAGGCGCGCCCGGCCGAGGCCCTGGCCGAGCCGGCGGCCTTTCTGCAACGCGCCGCCGCCGAGGCG CAGCCCTGGCAAGGCACGCAGGCCGAGGCCAAGGCGGTGCGGGTAGTGGCGGTGACCGCCTGCCCCACAGGCGTGGCGCACACCTTCATGGCCGCCGAAG CGCTGCAGCAGGCCGCCGAGCGCCTGGGCTGGCAACTGCGGGTGGAAACCCAGGGCTCGGTGGGCGCGCGCAACCCGCTGTCGGCCGAGGACATCGCCGC CGCCGACGTGGTGCTGCTGGCGGCCGACATCGAGGTGAACGCCGAGCGCTTCGCCGGCAAGCGCATCTTCCGCTGCGGCACCGGCGTGGCGCTGAAGCAG CCCGAGGCGACCTTGCGCAAGGCTCTGGAGGAAGGCGCCACGGAAAGCGCCGTCGCCGCCGTTGCGCAGAAGCCGGGCAAGGGCGAGGCGCGCGGGCTGT ACAAGCACCTGCTGACCGGGGTGTCGTTCATGCTGCCGATGGTGGTGGCCGGCGGCTTGCTGATCGCGCTGTCCTTCGTGTTCGGCATCCAGGCCTTCAA GGAGCCGGGCACCCTGGCCGCGGCGCTGATGCAGATCGGCGGCGAAAGCGCCTTCAAGCTGATGGTGCCGATGCTCGCCGGCTACATCGCCTGGTCCATC GCCGACCGCCCGGGCCTGGCGCCGGGGATGATTGGCGGCCTGCTGGCCAGCAGCCTGGGCGCGGGCTTCCTCGGCGGCATAGTGGCGGGCCTGCTGGCCG GCTACTCGGCGCGCGCGGTGAGCCAGTGGCTGAAGCTGCCGCAGAGCCTGGAGGCGCTCAAGCCGATCCTGCTGATCCCGCTGCTGTGCAGCCTGTTCAC CGGGCTGGTGATGATCTACGTGGTGGGCCAGCCGGTGGCCGGGCTGATGAGCGCGCTCACCGACTTCCTGGCCGGCATGGGCACGGCCAACGCCATCCTC CTCGGCCTGCTGCTGGGCGGCATGATGTGCGTCGACCTCGGCGGGCCGATCAACAAGGCCGCCTACGCCTTCTCCGTGGGCCTGCTGGCCTCGCAGAGCT ACGCGCCGATGGCGGCGACCATGGCCGCCGGCATGGTGCCGCCGATTGGCATGGGCCTCGCTACCCTGCTGGCCCGGCGCAAGTTCGCCCGGAGCGAGCG CGAGGCCGGCAAGGCGGCGCTGGTGCTGGGCCTGTGCTTCATCTCCGAGGGCGCCATCCCCTTCGCCGCCAAGGACCCGCTGCGGGTGCTGCCGGCGAGC GTGGTGGGCGGCGCGCTGACCGGGGCGCTGTCGATGTACTTCGGCTGCAAGCTGCTGGCGCCCCATGGCGGGTTGTTCGTGTTGCTGATTCCCAATGCGA TGAATCATGCGTTGGCGTATCTGCTGGCGATCGTCGTGGGGAGTGTGGTGACGGGGGTGATTTATGCGGTGCTCAAGCGGGATGAGGTGCAGGGGATGGT GGGGGTGCCGGGGCGGGCATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTGGGTGTTCAATTGCGGACGGAGTCCGCTCCTACGGTGGTGCCGTCCTGCGTAGGGGCTGGATGGGGATTGATTTTCGTAGGAGCGAGCTTGCTCGCG AACGGTGTTTGCCGGCGGCGGCTGGTGTTCATCCCGAAGAGCGCCCTCTCCCTAACCCTCTCCCTGAAGGGAGAGGGGACTGTTGGGCAGGCGCTGGTGT TCCTGAGTCAGCCGGCTAGCACGGTGACTACCGGCTGAAACCAGGCCTTCTCTTGGCACGGACAAGCCCCCTCTCCCTTCAGGGAGAGGGCTGGGGAGAG GGAGCGGAGTCAATCCAACGCACCAGCGCCGCCGGGAAACACGGTTCGCGAGCAAGCTCGCTCGCCCCTCAGGCACTCCGCCGCAATGGCTGCTCCTGCG CCGGCACCGGCAGCCGGTGCGAATCCCCCCGGCCCATGGCGAAGTATTCGAAGCCATAGCGCGCCATCCGCTCCGGATCGTAGAGGTTGCGCCCGTCGAA
Amino Acid Sequence
>PTS fructose transporter subunit IIBC
MNLALITACPNGQVTSLLSARLLRAAAERLGWSVCVESNEPQRPEQRLSAEQIGSADLVLVVSSQPLDLSRFAGKPLFQARPAEALAEPAAFLQRAAAEA QPWQGTQAEAKAVRVVAVTACPTGVAHTFMAAEALQQAAERLGWQLRVETQGSVGARNPLSAEDIAAADVVLLAADIEVNAERFAGKRIFRCGTGVALKQ PEATLRKALEEGATESAVAAVAQKPGKGEARGLYKHLLTGVSFMLPMVVAGGLLIALSFVFGIQAFKEPGTLAAALMQIGGESAFKLMVPMLAGYIAWSI ADRPGLAPGMIGGLLASSLGAGFLGGIVAGLLAGYSARAVSQWLKLPQSLEALKPILLIPLLCSLFTGLVMIYVVGQPVAGLMSALTDFLAGMGTANAIL LGLLLGGMMCVDLGGPINKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGMGLATLLARRKFARSEREAGKAALVLGLCFISEGAIPFAAKDPLRVLPAS VVGGALTGALSMYFGCKLLAPHGGLFVLLIPNAMNHALAYLLAIVVGSVVTGVIYAVLKRDEVQGMVGVPGRA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site