Strain | Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTACGCGCCGTGCAACACCATGGAAACCCTGCTGGTGCACAAGGCCATTGCCGCGCGCGTGCTGCCGCCGCTGGCCGCCATCTACCGCGACAAGGGCG TGGAGCTGCGCGGCGACGCCGCCACCCGCGCGCTGCTGGGCAGCGAGGTGCTGGAGGCGACCGAGGAAGACTGGCGCACCGAGTACAACGCGCCGATCCT GTCGATCCGCATCGTCGACGACCTGGACAGCGCCATCGAGCACATCAACACCTACGGTTCGCAGCACACCGACGCCATCGTCAGCGAGAACTTCAGCAAC GCCCGGCGCTTCCTCGCCGAGGTGGACTCGGCTTCGGTCATGGTCAACGCCTCGACGCGCTTCGCCGATGGCTTCGAGTACGGCCTGGGGGCGGAGATCG GCATTTCCACCGACAAGCTGCACGCCCGCGGCCCGGTCGGTCTGGAAGGCCTGACCAGCGAGAAGTACGTGGTCTTCGGCGACGGGCACGTGCGCACCTG
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DNA Sequence for Gene |
>PM1_RS04790
ATGAGTAAATGGCAAGCGCGGCGGATCGGCCTCTTCGGCGGCACCTTCGATCCGGTGCACATCGGGCACCTGCGCAGTGCGCTGGAAACCGCCGAGCTGC TGGGCCTGGACGAGTTGCGCCTGCTGCCGGCGGCGCGCCCGCCGCACCGCGAGACGCCGCAGGTCTCGGCGCAGCAGCGCCTGGCCATGGTCGAGCTGGC GGTGGCCGGCGTCGCGCCCCTGACGGTGGATGCCCGCGAGCTGGCCCGCGACAAGCCGTCCTACACCATCGACACCCTGGAATCGCTGCGCGCGGAGCTG GGGAGCGAGGCGCAGCTGTTCCTGATGGTCGGCTGGGATGCCTTCTGCGGCCTGCCCACCTGGCACCGCTGGGACGAACTGCTGCAGCACTGCCACATGC TGGTGCTGCAGCGCCCGGATGCCGACGTGGAAGCGCCGGAAGCCCTGCGCGATCTGCTGGCGGCGCGTAGCATGGCCGACCCCAACGCCCTCGCCGGGCC GGCCGGGCAGGTCACTTTCATCTGGCAGACGCCCCTGGCGGTGTCGGCCACCCAGATCCGCGCCCTGCTGGCGCAGGGGCGCTCGCCGCGCTTCCTGGTG CCGGACGCGGTATTGAACTACATCGAGGCGCACGGGCTGTACCGCGCGTCCCTGGCAAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGAGTCATTCAATGCAAACCGAACAACTGGTCGAGCTGGCCGTCGCCGCTCTGGAAGACATGAAAGCGCAGGACATCACCGTCCTCGACGTGCGCGACAA GACCAGCATCACCGACGTCATGGTCATCGCCTCCGGCTCCTCCAGCCGCCAGGTCAAGTCGCTGGCCGACAACGTCCTGGAGAAGGTCAAGGAACAGGGC GTCAAGCCCATCGGCAGCGAGGGCCAGGAAGGCGGCGAATGGGTGCTGATCGACCTGGGCAACGTCGTGGTCCACGTCATGCAGCCGGCCACCCGCCAGT TCTACGACCTGGAGCGCCTCTGGCTCGGCGCCGAACAGAGCCGCGCCCACCACAGCGGCGAGTAAGCGCCCTTGCGCCTGCGTCTGATCGCGGTCGGCTC GCGCATGCCGCGCTGGGTCGAAGAGGGCTGGCAGGAGTACGTCAAGCGCCTGCCCTCGGAGCTGTCCCTGGAACTGGTGGAGATCCCGCTGAACACGCGC
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Amino Acid Sequence |
>nicotinic acid mononucleotide adenylyltransferase
MSKWQARRIGLFGGTFDPVHIGHLRSALETAELLGLDELRLLPAARPPHRETPQVSAQQRLAMVELAVAGVAPLTVDARELARDKPSYTIDTLESLRAEL GSEAQLFLMVGWDAFCGLPTWHRWDELLQHCHMLVLQRPDADVEAPEALRDLLAARSMADPNALAGPAGQVTFIWQTPLAVSATQIRALLAQGRSPRFLV PDAVLNYIEAHGLYRASLAN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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