Pseudomonas sp. M1, PM1_RS03095

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCAGTTGCGGCGCGGCCTCGCTGCCGGTGATCGGCAGCACTTCCAGGTACAGGCCTTCGGTGAGGCGCTGGTTCAGGCGCAGTTCCTCCTCGCAGAAGT GCTTGCGCGCCGCGAGGTCGGTGAAGTCGAGGAAGCCGAAGTTCACCGGCTTCTTGATCTTGTAAACGTACTGGCCGGTGAGCAGGACCCAGGAAATGTG GGTTTCGATGACCCGCACCTGCTCCACCGGGTGGGGGTACAGGGCAGGGTTCTGCAGGGCAGCGATCAGAGTCTGGCTCACGGGATATTGTCCTTGGCTG TCCGGATTCGGGAGGCAGGCATTATGGCGGCATCGCCGGTGGCTGCAAACTTGCCTGGCGCCGCAGGCAACCAATCGGCCGCCCGCTGGTCGAAGCTGCG TCGCTTTGGCCGGGGCACTTCCGCGCGCCTGCGACAGAGCCCGGACACCGCCTCGCGCGGCGTCTGTCCCCTGTGGATAAAGTACGTATAATGCGCCGCC
DNA Sequence for Gene
>PM1_RS03095
ATGACGCGTCCCCGATCCCCCCGTTCCCGTAAGAATCAAAAAGCAGCTCCGTCGCGCAAGTGGCTGGGCTGGCTGCTCAAGCTCAGCCTCGTCGGCCTGG TCGTGCTGGCCGGTTTCGCCGTGTACCTCGATGCGGTCGTGCAGGAGAAGTTCTCCGGCAAGCGCTGGACCATCCCGGCCAAGGTCTATGCCCGGCCGCT GGAGCTGTTCGTCGGCCTGAAGCTGAACAAGGACGACTTCCTCCAGGAACTCGGCGCCCTGGGCTACCGCCGCGACGGCACGGTCAGCGGCCCGGGCATG GTGGCCGTGTCCGGCGGCACTGTCGACCTCAATACCCGCGGCTTCCAGTTCTACGAGGGCGCCGAGCCCGCGCAGCGCATCCGCGTGCGTTTCTCCGGCG ACTACGTGGCCGGCCTGTCCCGCGCCGACGGTTCCAAGCTGGACGTCGCGCGCATGGAGCCGCTGCTGATCGGCGGCATGTACCCCTCGCACAACGAAGA TCGCATCCTCATCAAGCTGGACGAGGTGCCGCCTTACCTGGTCGACACCCTGGTGGCGGTGGAAGACCGCGACTTCTGGTCCCACCACGGCGTCTCGCTG AAGTCCATCGCCCGCGCCGTCTGGGTCAACGCCAGCGCCGGGCAGTTGCGCCAGGGCGGCAGCACCCTGACCCAGCAGTTGGTGAAGAACTTCTTCCTGA CCAACGAGCGCAGCCTCAGCCGCAAGCTCACCGAAGCCATGATGGCGGTGCTGCTGGAGCTGCACTACGACAAGCGCGAGATCCTCGAGGGCTACCTCAA CGAGGTGTTCCTCGGCCAGGACGGCCAGCGTTCGGTGAACGGCTTCGGCCTGGCCAGCCAGTACTTCTTCAGCCAGCCGCTGGCCGAGCTCAAGCTGCCG CAGATCGCGCTGCTGGTGGGCATGGTCAAGGGGCCGTCCTACTACAACCCGCGGCGCAACCCGGAGCGCGCCATGGAGCGGCGCAACGTGGTGCTCGACG TGCTCGCCGAGCAGGGCGTGATCACCCCCGAGCAGGCCGCGGCGGCCAAGCAGGCGCCCCTGGGCGTGACGCGCCAGGGCAGCATGGCCAACAGCTCGTA CCCGGCGTTCCTCGACCTGGTGAAGCGCCAGCTGCGCCAGGACTACCGCGAGGAAGACCTGACCGAGGAAGGCCTGCGCATCTTCACCAGCTTCGACCCC ATCCTGCAGTACAAGGCGGAAACCGCGGTCAGCGAGACTTTCAAGCGCTTCGCCGGGCGCAAGGGCCTGGACCAGACGGAAACCGCGATGGTCGTGACCA ACCCGGAGACCGGCGAGGTGCAGGCGCTGATCGGCAGTCGCGATTCGCGTTTCGCCGGCTTCAACCGCGCGGTGGACGCCACCCGGCCGATCGGCTCGCT GGTCAAGCCGGCGGTCTACCTGACCGCCCTCGAGCGGCCCAGCCAGTACACCCTGACCACCTGGATCCAGGACCAGCCGTTCTCCATCAAGGGCAAGGAC GGCCAGGTGTGGACGCCGAAGAACTACGAAGGCAGCTCCAACGGCACCATCTTCCTCTACCAGGGGCTGGCGCGTTCGCTGAACCTGTCCACCGCCAAGC TGGGCCTGGACCTGGGCGTGCCCAACGTGCTCAAGACCCTCGAACGCCTGGGCGTGCAGGTGGACTGGCCGGCCTACCCGTCGATGCTGCTGGGCGCCGG CGCCATGACGCCGATGCAGGTGGCGACCATGTACCAGACCATCGCCAGCGGCGGCTTCAACACCCCGCTGCGCAGCATCCGCAGCGTGGTCGCCGCCGAC GGCCAGCCGCTCAAGCGCTATCCGTTCCAGGTCCAGCAGCGCTTCGACTCGGGCTCCATCTACCTGCTGCAGAACGCCATGCAGCGGGTGATGCGCGAGG GCACCGCGCGCTCGGCCTACAACCAGTTGCCGTCGAACCTGACCCTGGCGGGCAAGACCGGCACCACCAACGACTCCCGCGACAGCTGGTTCTCCGGTTT CGGCCAGGACCTGCTGGCGGTGGTCTGGCTGGGCCGCGACGACAACGGCAAGACGCCCTTCACCGGCGCCACCGGCGCGCTGCAGATCTGGACCAGCTTC ATGCGCAAGGCCGACCCCCTGCCGCTGGACATGCCGATGCCGGATAATGTCAGCATGGCCTGGGTCGATCCGCGTACCGGCCAGGGCAGCGACGCCAATT GTCCGGGCGCCGTGCAGATGCCCTATATTCGCGGAAGCGAGCCGGCGCCCGGCGCCGGCTGTGGCAACAACCAGACGCCGGCCGGCGAGGTCATGGACTG GGTCCGTGGCTGGCTGAACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGAGAGGATTCGAAGTGAAAAACGCGTGGTTTGCCGTGGCTGCCGCCGCGGCCGTGCTGTCCGGCTGCGCTTCCCCGCAGCAGGGCGCCATCCCGGTA CGGGATTCCGGCACCTCGGTGTCCAACCAGGAGCGGGTCGGCTATTCCAATGCCAACCGCCCGGCCAATGCCAGCACCGCGCCGAGCGCGGCCTCGCAGC CAGCGGGTGATTCCGGCGTGACCGTGATGGTGCCCCAGGATGCCGGCATGGCGCCGATCCAGACCTTCCCGGCGCAGACTGGCGCGGCGCCGCTGTCCAC CGGCCCGATCACCCCGGGCGTGCAATCCGGCAGCGTCCCCGCGGCCCCCGCCGCCAGCGCGCCGAGCAACATCAGCGCCACCGGCGGTTTCAGCCAGCAG ACCTACCAGCAGCCGGTCTACCAGCAGCAACAGCCCAGCTACCAGCAGCAGGCCCCGGCCGCGCCGGTGCAGGCGCCGTCCGGCATTCCTTCGCGCAACG
Amino Acid Sequence
>penicillin-binding protein 1B
MTRPRSPRSRKNQKAAPSRKWLGWLLKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPAKVYARPLELFVGLKLNKDDFLQELGALGYRRDGTVSGPGM VAVSGGTVDLNTRGFQFYEGAEPAQRIRVRFSGDYVAGLSRADGSKLDVARMEPLLIGGMYPSHNEDRILIKLDEVPPYLVDTLVAVEDRDFWSHHGVSL KSIARAVWVNASAGQLRQGGSTLTQQLVKNFFLTNERSLSRKLTEAMMAVLLELHYDKREILEGYLNEVFLGQDGQRSVNGFGLASQYFFSQPLAELKLP QIALLVGMVKGPSYYNPRRNPERAMERRNVVLDVLAEQGVITPEQAAAAKQAPLGVTRQGSMANSSYPAFLDLVKRQLRQDYREEDLTEEGLRIFTSFDP ILQYKAETAVSETFKRFAGRKGLDQTETAMVVTNPETGEVQALIGSRDSRFAGFNRAVDATRPIGSLVKPAVYLTALERPSQYTLTTWIQDQPFSIKGKD GQVWTPKNYEGSSNGTIFLYQGLARSLNLSTAKLGLDLGVPNVLKTLERLGVQVDWPAYPSMLLGAGAMTPMQVATMYQTIASGGFNTPLRSIRSVVAAD GQPLKRYPFQVQQRFDSGSIYLLQNAMQRVMREGTARSAYNQLPSNLTLAGKTGTTNDSRDSWFSGFGQDLLAVVWLGRDDNGKTPFTGATGALQIWTSF MRKADPLPLDMPMPDNVSMAWVDPRTGQGSDANCPGAVQMPYIRGSEPAPGAGCGNNQTPAGEVMDWVRGWLN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site