Pseudomonas sp. M1, PM1_RS02830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGATCTTCCGTGCCCGCCAGCTGCGCCAGGACGCCCAGCAGAAGCGCCACGAGCGGTTGCTCGAGGAGCTGTTGCAGCCGTCGGCATAACAAACGGCCC TTCCATAAAGATTGGCGATTTTTTAGACTATTCAGTCCGCCCGGAAACCCGGGCTCCATTTTCCGCAACGAGGAACACCATGGCCCGCGTCACCGTCGAA GACTGCCTGGACAACGTCGATAACCGTTTCGAGCTGGTCATGCTCGCCACCAAGCGCGCGCGCCAGCTGGCCACCGGCGGCAAGGAGCCGAAGGTAGCCT GGGAAAACGACAAGCCCACCGTGGTCGCCCTGCGCGAGATCGCTTCCGGCCTGGTCGATGCTGAAGTCGTTCAGCAGGAGGACGTGGTTGAAGAAGAACC GCTGTTCGCCGCCTTCGAAGACGAGGCCAACAACGAGGCCCTGTAATTCGATGACCGGCCGACGACCACAGGCGCCGTCCACTCGGCAGGGGGTGATGCC
DNA Sequence for Gene
>PM1_RS02830
TTGCCGAGCATAGACGCCTTCGCCGACCGGCTCTCGAGCTATCTCGGTCCGGACCAGGTCAACCTGGTCCGCCGTGCCTACTACTACGCCGAGCAGGCCC ACGACGGGCAGCGCCGCCGCAGCGGCGAGGCCTACGTCACCCATCCGCTCGCCGTCGCCAACATCCTCGCCGACATGCACATGGACCATCAGAGCCTGAT GGCGGCCATGCTGCACGACGTGATCGAGGACACCGGCATCGCCAAGGAAGCGCTCACCGCGCAGTTCGGCGAAACCGTCTCGGAACTGGTGGACGGGGTC AGCAAGCTGACCCAGATGAACTTCGAGTCCAAAGCCGAGGCCCAGGCCGAGAACTTCCAGAAGATGGCCATGGCCATGGCCCGCGACATCCGCGTGATCC TGGTCAAGCTGGCCGACCGCCTGCACAACATGCGCACCCTGGAAGTGCTGTCCGGCGAGAAGCGCCGGCGCATCGCCAAGGAAACCCTGGAAATCTACGC ACCCATCGCCAACCGCCTGGGCATGCACAGCATGCGCGTGGAATTCGAGGACCTGGGCTTCAAGGCCATGCACCCGATGCGCTCCGAGCGCATCCGCCAG GCGGTGAAGAAGGCCCGCGGCAACCGCCGCGAGATCGTCGGCAAGATCCAGGAATCGCTGGTCAACTGCCTCGCCCGCGAGGGCATGGAAGGCCAGGTGC TGGGCCGCGAGAAGCACCTGTTCAGCATCTACAAGAAGATGCGCGGCAAGCGCAAGGCGTTCAACGAGATCATGGACGTCTACGCCTTCCGCATCATCGT CGACAAGGTCGACACCTGCTACCGCGTGCTCGGCGCCGTGCACAACCTGTACAAGCCGTTCCCCGGTCGCTTCAAGGACTATATCGCGATTCCCAAGGCC AACGGCTACCAGTCGCTGCACACCACCCTGTTCGGCATGCACGGCGTGCCCATCGAGATCCAGATCCGCACCCGCGAGATGGAAGAGATGGCCAACCACG GCATCGCCGCGCACTGGCTGTACAAGTCCAACGAGGATGAGGTGCAAAAAGGCACCCACGCCCGCGCCCGCCAGTGGGTCAAGGGCATCCTCGAACTGCA GCAGCGCGCCGGCAACTCGCTGGAATTCATCGAGAACGTGAAGATCGACCTGTTCCCGGACGAGGTCTACATCTTCACGCCCAAGGGCCGCATCATGGAG CTGCCCAAGGGCTCCACGGCGGTGGACTTCGCCTACGCGGTGCACACCGACGTGGGCAACAGCTGCATCGCCTGCCGCATCAACCGCCGCCTGGCGCCGC TGTCCGAACCGCTGCAGAGCGGCCAGACGGTGGAAATCGTCACCGCGCCGGGCACCCGGCCGAACCCGGCCTGGCTCAACTTCGTGGTCACCGGCAAGGC GCGCACGCACATCCGCCACGCGCTCAAGCAGCAGCGCCGCTCCGAGTCCATCAGCCTTGGCGAGCGCCTGCTGAACAAGACCCTCGCCGGCTTCGACAGC CACCTGGAGAAGATCCCCACCGAACGCATCCAGGGCGTGCTCAACGAGTACCGCATGGAAGTCTTCGAGGACCTGCTGGAAGAAATCGGCCTGGGCAACC GCATGGCCTACGTGGTCGCCCGCCGCCTGCTCTCCAGCGAAGGCGACGCCGCCGCCACCAACGCCGAGGGGCCGCTGGCGATCCGCGGCACCGAGGGCCT GGTGCTGAGCTACGCCAAGTGCTGCACGCCGATCCCCGGCGACCCCATCGTCGGCCACCTGTCGGCCGGCAAGGGCATGGTGGTGCACCTGGAAAGCTGC AGGAACATCAGCGAAATCCGCAACAACCCGGAAAAATGCATCCAGCTCAGCTGGGCCAAGGATGTCACCGGCGAGTTCAACGTCGAGCTGCGCGTCGAGC TGGAACACCAGCGCGGCCTGATCGCCCTGCTTGCGACCAGCGTCAACGCCGCCGACGGCAACATCGAGAAGATCAGCATGGACGAGCGCGACGGTCGCGT CAGCGTGGTCCAATTGGTGGTCAGCGTGCACGACCGCGTGCACCTGGCCCGCGTCATCAAGAAGCTGCGCGCGCTCAAGGGGGTGGTCCGGATCACCCGC GTGCGCAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCACCCCTCGCAAGGAGTCGACATGACCAAGACCGTTATCCACACCGACAAGGCCCCCGCGGCCATCGGCACCTACTCCCAGGCGATCAAGGCCGGCA ACACCGTCTACGTCTCCGGGCAGATCCCGCTGAACCCGCAGACCATGGAACTGGTCGAGGGCTTCGAGGAGCAGGTCGTCCAGGTGTTCGAGAACCTCAA GGCGGTGATCGAGGCTTCCGGCGGCTACCTGCACGACGTGGCCAAGCTGAACATCTTCCTCACCGACCTGTCGCACTTCGCCAAGGTCAACGAGATCATG GGCCGCTACTTCACCCAGCCCTACCCGGCGCGCGCCGCCATCGGCGTGGCCGCCCTGCCCAAGGGCGCCCAGGTCGAGATGGACGCCATCGTCGTCCTGG AGTAATCCTCCACTCCCGAACGGGGCCCTCGCGGCCCCGTTCGTTTTTCCCCTGTTCGTCCGCAAGGAGCACCCGCATGCGTCGCGCCCTCGTCCTGAGC
Amino Acid Sequence
>RelA/SpoT protein
MPSIDAFADRLSSYLGPDQVNLVRRAYYYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALTAQFGETVSELVDGV SKLTQMNFESKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHSMRVEFEDLGFKAMHPMRSERIRQ AVKKARGNRREIVGKIQESLVNCLAREGMEGQVLGREKHLFSIYKKMRGKRKAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPFPGRFKDYIAIPKA NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANHGIAAHWLYKSNEDEVQKGTHARARQWVKGILELQQRAGNSLEFIENVKIDLFPDEVYIFTPKGRIME LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGQTVEIVTAPGTRPNPAWLNFVVTGKARTHIRHALKQQRRSESISLGERLLNKTLAGFDS HLEKIPTERIQGVLNEYRMEVFEDLLEEIGLGNRMAYVVARRLLSSEGDAAATNAEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLESC RNISEIRNNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLATSVNAADGNIEKISMDERDGRVSVVQLVVSVHDRVHLARVIKKLRALKGVVRITR VRS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site