Strain | Pseudomonas sp. M1 PM1contig_002, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCGCCCGCTGCACATGGTGCTGCTCAAGGCGCCGACGCTGAAGCCGCTGTACGCCCACTGCGTCGGCGGCGGGCCCAAGCCGCGGGTCACCGTGACCA CCCACCCGGCCGCCGACGGCCAATGGGTGTGGTACCTGGGCGGCGACATCGCCGAAGCCGAGGGCGTGGCCCGCAGCGAAGCCGAGCAGATCGCCGAGGC CCAGCGCGAGCTGCGCAAGCTGCTGCCCTGGGTCGACCTCTCCGCCGCACGCTGGGCCACCCTGCGGGTGGACCGCGCCGAGCCGGCGCAATCCGGCCTG CTGCGCCCGGACAGCGCCTTCCTCGCCGACCAGGGCCGCCTGCTGGTGGGCTGGCCGACCAAGCTGGCGCTGGCGCCGAACTTCGCCGACCGCGTCTTCG AGGCCCTGGACCGCGACGGCATCCGCCCCGCCGCCGGCACACCGCTGCCGGAGCTGCCTCGCCCGCCCCTGGCCCGCCCGGTGTGGGAGGAGCTGCTGCC
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DNA Sequence for Gene |
>PM1_RS01155
ATGAGCGGCCTGCACGCACTGCACCGCCCGCTGGGCCGCACCGGCCTGAACGTCTCGCCGCTGGGCCTGGGCACCGTCAAGCTGGGCCGCGACCAGGGCG TGAAGTACCCCAGCGGCTTCCGCATCCCCGACGACCGCGAGGCCGCCGACCTGCTGGCGCTGGCCCGCGAGCTGGGCATCAACCTGATCGACACCGCGCC GGCCTACGGCCGCAGCGAGGAGCGCCTCGGCCCGCTGCTGCGCGGCCAGCGCCAGGACTGGGTGATCGTCAGCAAGACCGGCGAGGAGTTCGAAAACGGC CAGTCGCGCTTCGACTTCAGCGCCGCCCACACCCGCCTGTCGGTGGAGCGCAGCCTGCGCCGCCTGGAGACCGACTACATCGACCTGGTGCTGGTGCACT CCGACGGCAACGACCTGCACGTCCTGCAGCACACCGAGGTCTACGAGAGCCTCGAACGGCTCAAGCAGGAAGGCCTGATCCGCGGCTTCGGCTTCTCCGG CAAGACCGTCGATGGCGGCCTGCTGGCGCTGCAGCGCGGCGACTGCGCCATGGTCACCTACAACCTCAACGAACAGGCCGAGAAAGCGGTGATCGACCAT GCCCTGGCGCAGCACCGCGGCATCCTGGTGAAGAAGGCCCTGGCCAGCGGCCACGCCTGCCTGGGCGAGGGCCAGGACCCCGTGCGCGCCAGCTTCGAAC TGGTGTTCGGCCACCCCGGGGTGGGCGCGGCCATCGTCGGCACCATCGACCCGCAGCACCTGCGGCACAACGTCGCGCTGGCGGCCGAAGTCCTCGGCGG CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCTGGCGGCCGAATCCGGCGGCGCCACGACCGTTGATCGGCAGTCACCTAAGGTTGACACAAAGGGCGCATTCCTGTGCCATGCTCAGACGCCGCGGT GAAAAACCGCGGCACGTAAAATTGCCGCCAAAAGCTCGCTGACAGGAAAAACATCCGAAAACCAGGCGCCTTTCAGGGCTAACCTCGAAATAATCGAGGG TTTTCGAAGTTCGCCGTCAACGCCCTAGCCACTGGCAACCCGGAACGATCGGCCAGGCCGCCCACCCCTGAAGGCGGCCCGATGCGCCCTGTACGACGAG GACCGCCCATGCCCCGTACGCTCGCCCGCAAGGACCCGACCGCCTTCAAGACCCTGCCGTTGCTGGTCGAGGCCAACCCCGACAGCCTGGTCTACCAGGG CCTCGGCCTGCCGCTGAATTTCTCCCAGGTCCTGGAGCGCCGCCGCCCGGTCGAGGTGGCCGATGCCCAGCGCTTCACCGCCGAGCTGGCCAACCTGGGC
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Amino Acid Sequence |
>aldo/keto reductase
MSGLHALHRPLGRTGLNVSPLGLGTVKLGRDQGVKYPSGFRIPDDREAADLLALARELGINLIDTAPAYGRSEERLGPLLRGQRQDWVIVSKTGEEFENG QSRFDFSAAHTRLSVERSLRRLETDYIDLVLVHSDGNDLHVLQHTEVYESLERLKQEGLIRGFGFSGKTVDGGLLALQRGDCAMVTYNLNEQAEKAVIDH ALAQHRGILVKKALASGHACLGEGQDPVRASFELVFGHPGVGAAIVGTIDPQHLRHNVALAAEVLGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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