Pseudomonas sp. M1, PM1_RS28560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCCTCGCCGCGACCAACCGCGACCTGGCCGGCATGGTGGCCCAGGGGGCGTTCCGCGAGGACCTGCTCTACCGCCTCAACGTCATCGTCCTCAACCTGC CGCCGCTGCGCGAGCGCGCCGAGGACATCCAGGGCCTGGCCGAGCGCTTCCTCGCCCGCTTCGTCAAGGACTACGGGCGCCCGGCCCGCGGCTTCAGCCC GGCCTCGGCCGCGCTGCTGCGGCAGTACGCCTGGCCGGGCAACGTGCGCGAGCTGCGCAACGTGATCGAGCGCGCCAGCATCATCTGCAACCAGGAACTG GTGGAGCCCGAGCACCTGGGGCTCGGCGAACAGAGCGGCGCCGCCGCCGTGCCGCGGGTCGGCGAGGCGCTGAGCCTGGAGGAACTGGAGAAGGCCCACA TCGCCTCGGTGATGGCCAGCGCCCCGACCCTCGACCAGGCGGCGAAGATCCTCGGCATCGACGCCTCCACCCTGTACCGCAAGCGCAAGCAGTACAACCT
DNA Sequence for Gene
>PM1_RS28560
GTGAAGCGCGCGCTGACTCTGCGCTCGCGGATGTTCCTAAGCATCTCGGCGCTGATCACCCTGGCCCTGATCGGCCTGCTGCTGGGGGTGTTCAGCGTGA TGCTGATGGGCCGCGAACAGGAGCGGCTGATCTCGCACAACTTCGCCACCATCGCCAGCAGCCAGCAGCTGCGCCAGTCCCTGGACGACCAGTTGGCCCA GCTGCTCAGCGACAGCCCCGACGCGCAGCGCCTGGCGCGGCTGCGCGAGCAGTTCGACCGCTACCTCGCCGAAGGCCGGGCGAAAGCCGCCAGCGACGTC GAGCGCACCCTCTACGAGCGCATCGACCAGGCCAACCAGGAGTTCCAGGGCCAGGTCAGCTCCTCCGGCAGCAACCGCTGGAGCCTGGTGGTGGAGAGCG ACTTCAGCCGCACCTTCACCTCCCTGCACCAGTACCTGCTGGCGCTGCACAACCACGCCATCCAGACCATCAGCGACGCGGAGCGCAGCTCGCGCCGCCA CGCCTGGCTGATCGCCAGCCTGCTGGGGCTGGTGGGCGTGGCCATGCTGGTGATCGGCTTCGTCACCGCCCACGGCATCGCCCGCCGCTTCGGCGCCCCC ATCGAGGCCCTGGCGCAGGCCGCCGACCGCATCGGCAAGGGCGACTTCGAGGTCAGCCTGCCGGTCTCGCGGGAAGCCGAGATGGCCTCGCTGAGCCGGC GTTTCGGCCTGATGGCCCAGGCCCTGGCCGAGTACAAGGCGACCAACATCGAGGCGGTGCTGGCCAGCCAGCGGCGCCTGCAGGCGGTGCTCGACAGCAT CGACGACGGCCTGGTGATCATCGACCGGCGCAGCCGCATCGAGCACGCCAACCCGGTGGCCAGCCGCCAGCTGTTCTCCCGGGCCGACCCCCATGGCCAG CTGCTGGGCGAGCTGATCGACAACCAGGAGCTGCTGCAGGCCACCGGCCTGGTGCTGCAGGGCGAGTCGATGGGCGACGATACGCCCCAGGACCTGCAGG TCGAGATCGGCGGCGAAAACCGTCTGCTGGCCTGGACCCTGGCCCCGGTCACCCACGACGACGGGCGCAACATGGGCGCGGTGCTGGTGCTGCGCGACGT CACCGAGCTGCGCGCCTTCGAGCGGGTGCGCAGCGAATTCGTGCTGCGCGCCTCCCACGAGCTGCGCACCCCGGTCACCGGCCTGCACATGGCCTTCGCC CTGCTGCGCGAACGCCTGGCGCTGCCCGAGGGCAGCCGCGAGCGCGAGCTGGCCGATACCGTCGACGAGGAAATGCAGCGCCTGGTGCGGCTGATCGACG ACCTGCTGAACTTCTCCCGCTACCAGGACGGCCAGCAGAAGCTCGACCGCCAGCCCTGCACGGTGGGCGAGTTGCTGGAACAGGCGCGCCAGCGCTTCCT CGCCCGCGCCCAGGCCCAGGGCATCGGCCTGGGGATAGTGCTGGAGGACCAGCTGCCGGTCCTAAGCGTCGACCGCCTGCGCCTGGAGCGCGTGCTGGAC AACCTGCTGGGCAACGCCCTGCGCCACACCCCGAAGGGCGGCAGCGTGCAGCTGCTCGCCCAGCGCCAGAGCCAATGGCTGATGCTGGCGGTGGAGGACT CCGGCGAGGGCATCGCCTATAGCCAGCAGGCGCGCATCTTCGAGCCCTTCGTGCAGGTGGGCCGGCGCAGCGGCGGCGCCGGCCTGGGCCTGGCCCTGTG CAAGGAGATCGTGCAGCTGCACGGCGGGCGCATCGGCGTGCGCTCGCAGCCCGGCCAGGGCACGCGCATCTACATGCTGCTGCCGGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGCCGGCGCGGCCATGGAGGTGGGCACCGCCAGCAGCAGCGCGGCGGTCTCCAGGTCCGGCACGCCGTCGAAGCGCGCCGGCCGGTAGCGCATCTGGA AGGCGGCGATGACGTTGCGCGTCACCTCGTCCAGCTGGCCATTGAGCGGCACCGCGTAGCCATGCCGCGCCAACTGCTGCTGGAACCAGCCGGGCGCCGG CAGCTGGCCGTTCAGCTCGGCCAGGCGATGCGCCAGGTCGCCGGGCTGCGGCCAGGGGATCAGGCCGGCGTCGGCCAGGCGCTTCCAGGGGAAGGCCGGG CCCGGGTCGACCTTGCGCTGCGGGGCGATGTCGCTGTGCCCGAGGATGTGCTCGGGGGTGATGCCCTGGCGCTTGACGATGTCCTTCAGCAGCAGGATGA GGGCATCGATCTGGCCCTGTGGATAAGGTGTCCACACCCGCCCTTCCGGCGTCTCGCGGTAACCCGGGTTGACCAGCTCGATGCCGATCGAGGTGGAGTT
Amino Acid Sequence
>two-component sensor
MKRALTLRSRMFLSISALITLALIGLLLGVFSVMLMGREQERLISHNFATIASSQQLRQSLDDQLAQLLSDSPDAQRLARLREQFDRYLAEGRAKAASDV ERTLYERIDQANQEFQGQVSSSGSNRWSLVVESDFSRTFTSLHQYLLALHNHAIQTISDAERSSRRHAWLIASLLGLVGVAMLVIGFVTAHGIARRFGAP IEALAQAADRIGKGDFEVSLPVSREAEMASLSRRFGLMAQALAEYKATNIEAVLASQRRLQAVLDSIDDGLVIIDRRSRIEHANPVASRQLFSRADPHGQ LLGELIDNQELLQATGLVLQGESMGDDTPQDLQVEIGGENRLLAWTLAPVTHDDGRNMGAVLVLRDVTELRAFERVRSEFVLRASHELRTPVTGLHMAFA LLRERLALPEGSRERELADTVDEEMQRLVRLIDDLLNFSRYQDGQQKLDRQPCTVGELLEQARQRFLARAQAQGIGLGIVLEDQLPVLSVDRLRLERVLD NLLGNALRHTPKGGSVQLLAQRQSQWLMLAVEDSGEGIAYSQQARIFEPFVQVGRRSGGAGLGLALCKEIVQLHGGRIGVRSQPGQGTRIYMLLPV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site