Pseudomonas sp. M1, PM1_RS28405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGAGTGCTACCCGGTCACCGGCGAGATCACCTACGGCCTGGAGCGCCTGGCCATGTACATCCAGGGCGTCGACTCGGTGTACGACCTGGTGTGGGCCG ACGGCCCGTTCGGCAAGGTCACCTATGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAGCACGCCAACGTCGAGAAGCTGTT CGAACTGTTCGACTTCTACGAAAGCGAAGCCAACCGCCTGATCGAGCTGCAGCTGCCACTGCCTACCTACGAGATGGTCCTCAAGGCCTCGCACACCTTC AACCTGCTGGACGCGCGCCGTGCCATCTCGGTGACCGAGCGTCAGCGCTACATCCTGCGCGTGCGCACCCTGGCCCGTAACGTGGCGCAGAGCTACCTGC AGGCGCGCGCGCGCCTGGGCTTCCCGATGGCCACCCCCGCTCTTCGTGATGAAGTGCTGGCGCGTGACGAAGTACTGGCCAAGCTGAAGGAGGCCGAATA
DNA Sequence for Gene
>PM1_RS28405
ATGAGCGCGAAGGATTTCCTCGTCGAACTGGGCACCGAAGAGCTGCCCCCCAAGGCCCTGAAAAGCCTCGGTGAAGCCTTCCTGGCCGGCATCGAGAAGG GCCTTAAGGCCGCAGGCCTGACCTACTCGGCCGCCCGCTACTACGCCGCGCCGCGCCGCCTGGCCGTGCAGATCGACCAGCTCGCCGTGCAGCAGCCCGA CCGCACCGTCAACCTCGACGGCCCGCCGCTGCAGGCCGCCTTCGACGCCAGCGGCAACCCGACCCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTG GACCTGGCGCAGATCGACCAGAGCGGGCCCAAGCTGAAGTTCAGCCAGAGCATCCCCGGCCAGCCGGCCATGGGCCTGCTGCCGGGCATCGTCGAAACCT CGCTGAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGCCGCGAAGAGTTCGTGCGTCCGACGCAGTGGCTGGTGATGCTGTTCGGCGACGA GGTGGTGGAGTGCGAGATCCTCACCCGCAAGGCCGGCCGTGAATCCCGTGGCCACCGCTTCCACAACCCGGACAACGTGCTGATCTCCAGCCCCGCCAAC TACCTGGAAGACCTGCGCAGCGCCCACGTGCTGGCCGACTTCGCCGAGCGCCGCGAAATCATCGCCAAGCGCGTCGCCGAGCTTGCCGCCGAGCAGAAGG GCAGCGCCATCGTGCCGCCGGCCCTGCTCGACGAAGTGACCGCCCTGGTCGAATGGCCGGTGCCGCTGGTGTGCTCCTTCGAGGAACGCTTCCTCGCCGT GCCCCAGGAAGCGCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACGCCAACGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCC AACGTGCAGAGCAAAGCGCCCGAGCACATCGTCTCGGGCAACGAGAAGGTCGTGCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAGGACCAGA AGCAGCCGCTGGAGCGCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCCCAGCTCGGCACCGTGTTCGAGAAGGCCGAGCGCGTCTCCGCCCTGGC CGCCTTCATCGCCGAGCGCATTGGCGGTGACGCGAAGAACGCCGCCCGCGCCGGCATCCTCTCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAGTTC CCGGAGATGCAGGGCATCGCCGGCTACTACTACGCCACTGCCGGTGGCGAAGCCAACGACGTCGCCCTGGCGCTGAACGAGCAGTACATGCCGCGCGGCG CCGGCGCCGAGCTGCCGAGCACCCTGACCGGTGCGGCGGTGGCGGTGGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCCAC CGGCAGCAAGGACCCGTACGCCCTGCGCCGCGCCGCCCTGGGCGTGCTGCGCATCCTCATCGAGAAGCAGCTGGACCTCGACCTGGGCGAGGCCATCGCC TTCGCCGTCGGCCAGTACGGCGACAAGGTCAAGGCCGAGGGCCTGGCCGCCCAGGTCCAGGACTTCATCTTCGACCGCCTGCGCGCGCGCTACGAGGACG AAGGCGTAGACGTCGCCGTGTACCAGGCCGTGCGCGCCCTGACGCCGACCGCGCCGCTGGACTTCGACCAGCGCGTGCAGGCCGTGCAGGCCTTCCGCCA ACTGCCCGAAGCCGAGGCCCTGGCCGCCGCCAACAAGCGCGTGTCCAACATCCTCGCCAAGGCCGAAGGAGAGGTGCCGCAGAGCGTGAATGCCGGCCTG CTCAACGAGGCCGCCGAGAAGGCCCTGGGCAGCGCCGTGGCGGCCGCCGAAGGCGAAGTGGCGCCGCTGGCCCGGGCGCGCGACTACCGCACCGCCCTGG CCCGCCTGGCAGCCCTGCGCGCGCCGGTCGATGCGTTCTTCGAGGAAGTCCTGGTCAACGCCGACGACAGCGCCGTGCGCGCCAACCGCTACGCCCTGCT GGCGAAGCTGCGTGGGCTGTTCCTCGGCGTCGCCGACATCTCTCTGTTGGGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGAGCTGGAGGCTGGAAGCCTGAAGCTGGAAATTCTTCCCGCTTCAAGCTTCCGGCTTCAAGCCTCTGGCTAAAGCTATGAAGTTATTGATCGTCGACC GCGACGGCGTCATCAACCTGGACTCCGACGCGTACATCAAATCCCTCGACGAGTGGATTCCCATTCCCGGCGCCATCGCCGCCATTGCCCGCCTGAGCAA GGCCGGCTGGACGGTCGCGGTGGCCACCAACCAGTCCGGTATCGCCCGCGGCTACTACGACCTGGCGACACTGGAAAGCATGCACGCGCGGCTGCGCGAG CTGGTGGCGGAGCAGGGCGGCGAACTGGGGCTGATCGTCCATTGCCCCCATGGACCCGACGAAGGCTGCGAGTGCCGCAAGCCGAAGCCGGGTATGCTCA GGCAGATCGCCGCGCACTACGACGTTCCGCTCAAGGGCGTATGGTTCGTCGGCGACACCCGGGGTGACCTGGACGCCGCCCTGGCCGTCGACTGTCAGCC
Amino Acid Sequence
>glycyl-tRNA synthetase subunit beta
MSAKDFLVELGTEELPPKALKSLGEAFLAGIEKGLKAAGLTYSAARYYAAPRRLAVQIDQLAVQQPDRTVNLDGPPLQAAFDASGNPTQAALGFAKKCGV DLAQIDQSGPKLKFSQSIPGQPAMGLLPGIVETSLNDLPIPKRMRWAARREEFVRPTQWLVMLFGDEVVECEILTRKAGRESRGHRFHNPDNVLISSPAN YLEDLRSAHVLADFAERREIIAKRVAELAAEQKGSAIVPPALLDEVTALVEWPVPLVCSFEERFLAVPQEALITTMQDNQKYFCLLDANGKLLPRFITVA NVQSKAPEHIVSGNEKVVRPRLTDAEFFFKQDQKQPLERFNERLKNVVFQAQLGTVFEKAERVSALAAFIAERIGGDAKNAARAGILSKCDLATEMVGEF PEMQGIAGYYYATAGGEANDVALALNEQYMPRGAGAELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLGEAIA FAVGQYGDKVKAEGLAAQVQDFIFDRLRARYEDEGVDVAVYQAVRALTPTAPLDFDQRVQAVQAFRQLPEAEALAAANKRVSNILAKAEGEVPQSVNAGL LNEAAEKALGSAVAAAEGEVAPLARARDYRTALARLAALRAPVDAFFEEVLVNADDSAVRANRYALLAKLRGLFLGVADISLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site