Pseudomonas sp. M1, PM1_RS28030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGGGCGCATCGCCCAGCACAGCAACGGCCTGCTCAGCCGCCTGCGCCCGACCCTGCTGGAAGACCACCCGCTCCCCGGCCCGCCCGGCCGCGGGGCGA TCCTCATGCGCTTCGGCGAGGGCGACAACGCCCTGGCCGTGGTGATGATGCACCTGGCCCTGGGCCCGCGCACCCGCACCCGCCAGCTCGCCTACATCCG CGAGCTGCTGCAGAACTACCGCCACCAGGTGCTGATGGGCGACATGAACACCCACGCCAGCGACCTGCTGGAGACTTCGCCGCTGCGCGATCTCGGGCTG ATCGCCCCGCAGGTTCAGGCGACCTTTCCCAGCTGGCGCCCGCAGCGCTGCCTGGACCACATCCTGCTCAGCCCCGGGCTGACCCTGGAGCGGGTCAGCG TGCTGCCGGAGCCGATCTCCGACCACCTGCCGGTGTCCGTGGAGATCCGCCTGCCCGACGGCTGCCGGCAAGACTCCGCGCTTTCTCTCAAGGACGCTCG
DNA Sequence for Gene
>PM1_RS28030
ATGAGCCGCGACGACAACCAGCGCTGGAAGGAAAAGTACCTCGCCAACATCGACCAGCAGGAGCGCCTGGAGCGCCGCTGGGAGGTGCGCGTCGACCTGC TGCGCCGCGGCCTGGTGCGCAGCAGCCTGGCTGCCGAGGGCAGCGACAAGGCGGTCGACCAGTGCATGCAGGAACTGCGCGAACTGCTGCGCCGCAACGA TATTGACGCGGGCCTGGCGCGGCTGATCCCGCGCCTGGAAAAGACCGTGCTGGACTCCGAGCAGCGCCGCCAGCAGCGCATCCGCCAGAACATCACGGCG CTGCAGCAGATCGCCCAGCAGCTGCTGAACCTCGACCTGCCGCGGGACGTGCGCCTGCCGCTGAAACTGTTCGCCCGCGACCTGGAGGCGCGCGCCAGCC AGTCCCGCGAGCTGCCGGTGCTGCTCGGCGAGCTGGGCAACCTGCAGCGGCGCGTGCTGGAACAGCTTTCCGACGCCGAGGCGCCGCGCCCCGGCCTGCT GCAGCGCCTGTTCGGCGGTCGCGAAGACGGCGAGGACGGCCCCGCCCAGCCCGCGCCCGCCAGCAACGGCGCGCCGGCCAGCGAGACGCCGGCGGCGCCG GCCAGGGCCGAGGCCGCCGTGCTCGCCGAGGCTGGCGTAGCCGTCGCGGACGAAGAACCCCCGGCCATCCCGCAGCAGGCCGCCGCCGTGGCGGTGCAAG CCGATCCCGAACCGCTGCCGTCACCCGCGCCGTCCGCCGCCCTGCTGGACAGCCTGCCGCTGCCCGCCGACCTCATCCCCAGCGCGCCGCGCCCGGTGCT GCTGGACGGCGAGGGCGAGCAGCACTACGCCCTGCCGCCGATGCCCGAGCCCGGCTACAGCGCGGTGGCGCCGCACATCGAGGCCAGCCTGCTGAACCTG CTCGACCAGCTGCAGCTGCCGGCCACCTACCGCCCACAGGCCCAGGCTCTGCGCGAGCGCATCAACGGCAGCCTGAACTGGTACGAACTGGTGCCGGTGC TGGACGACCTGGCGGTGCTGGTGCTGGCCCTCAACGACAGCGGCCAGGCCGCCTTCGAAGGCTACCTGCACCAGCTCAACGACCGCCTGAGCACCTTCCT CGACAGCCTCGGCGCGGTGCAGCAGGGCCAGGACGCCGTGTCCGACAGCGCGCGGCGCCTGGACGATGAACTGCGCGACCAGGTCAGCGGCCTGCAGAAC AGTGTGCAGCAGGCCACCGACCTGGACAGCCTCCGGCGCTCGGTGGATGAGCGCCTGGAAGGCCTGCTCGGCAGCATCGAGCGGCACCGCCAGGAACGCG AGGCCCGCGAGCGCGAGGCCGGGGAGCGCCTGCAGGCGCTGGTGGCGCGGGTTTCCTCGATGGAGGAAGAGGCGCGCAGCTTCCAGGCCAGCATCGAGGA CCAGCGGCAGAAGGCCCTGACCGACCCCCTCACCGGCCTGCCCAACCGCGCCGCCCTGAGCGAGCGCCTGGAACTGGAAGTGGCGCGGGTGCAGCGCTTC GGCGGCGAACTGCTGCTGGCGGTGCTGGACGTCGACCACTTCAAGCGCATCAACGACGACTACGGCCACCTGGCCGGCGACAAGGTGCTGAAGATCATCG CCGGCGAGCTGGCCAAGCGCCTGCGCAAGACCGACTTCATCGCCCGCTTCGGCGGCGAGGAATTCGTCGTGCTGCTGCCCTCCACGCCCCTGGACGGCGG GCAGCAACTGCTGGAAGCCCTGCGCACGTCGGTGGAACGCATCCCCTTCCACTTCAAGGGCGAACCGCTGGTCATCACCTGCTCCGCGGGCCTCACCCAG TTCCGCGCCGGCGAGCGCAACGAAGCGGCCTTCGAGCGCGCCGACCAGGCCCTGTACCGCGCCAAGCGCGGCGGCCGCAACCGCCTGGAGATGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCGCTGCCCGTGGGCGCTCCTGCACCCGCCGGCAAACACAACCCCCGTAGGATGGCGTTGAGCGAAGCGATACCCATCGCCACGGCAGCATGGGTTTCG CAGGCTCAACCCATCCTACGAAAAGCGCCCCGGTGCGGTGGGCAGCCGCTCCTGCGTCGCCCCAACCTCCCATCACCCGAACTTGACGAATGAAAGCTCT TGGGTTTTGATTCGCACCTGTAACTTTCGAATCGAAACATAAGCCTTCATGTCGAAACGCAACACGCCCCAGCGCCGCCACGAGATCCTCGCCCTGCTCA ACCAGCAGGGCGAGGTCAGCGTCGACGACCTCGCCCGGCGTTTCGCCACTTCCGAGGTGACCATCCGCAAGGACCTGGCCGCCCTGGAGAGCAACGGCCT GCTGCTGCGCCGCTACGGCGGCGCGGTGCCCATGCCGCAGGAACTGCTGGCCGAGCCGAGCCCGCCGCTGTCGCCCTACAAGCAGGCCATCGCCCGCGCC
Amino Acid Sequence
>diguanylate cyclase
MSRDDNQRWKEKYLANIDQQERLERRWEVRVDLLRRGLVRSSLAAEGSDKAVDQCMQELRELLRRNDIDAGLARLIPRLEKTVLDSEQRRQQRIRQNITA LQQIAQQLLNLDLPRDVRLPLKLFARDLEARASQSRELPVLLGELGNLQRRVLEQLSDAEAPRPGLLQRLFGGREDGEDGPAQPAPASNGAPASETPAAP ARAEAAVLAEAGVAVADEEPPAIPQQAAAVAVQADPEPLPSPAPSAALLDSLPLPADLIPSAPRPVLLDGEGEQHYALPPMPEPGYSAVAPHIEASLLNL LDQLQLPATYRPQAQALRERINGSLNWYELVPVLDDLAVLVLALNDSGQAAFEGYLHQLNDRLSTFLDSLGAVQQGQDAVSDSARRLDDELRDQVSGLQN SVQQATDLDSLRRSVDERLEGLLGSIERHRQEREAREREAGERLQALVARVSSMEEEARSFQASIEDQRQKALTDPLTGLPNRAALSERLELEVARVQRF GGELLLAVLDVDHFKRINDDYGHLAGDKVLKIIAGELAKRLRKTDFIARFGGEEFVVLLPSTPLDGGQQLLEALRTSVERIPFHFKGEPLVITCSAGLTQ FRAGERNEAAFERADQALYRAKRGGRNRLEMG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site