Pseudomonas sp. M1, PM1_RS26475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCAAGCGCTACGTGGAACCGGGCCTGGCGCTGATCGGCGATGCCGCGCACACCATCCACCCGCTGGCCGGGCAGGGCGTCAACCTGGGCTTCCTCGACGC CGCGGTGCTGGCCGAGGTGCTGATGCACGCCCACGCCCGTGGCGAGCGCATCGCCGACGAGCGCGTGCTGAGCCGCTTCGAACGCCGGCGGATGCCGCAC AACCTGGCGATGATGGCGGCGATGGAAGGCTTCCAGCGCCTGTTCCAGGCCGACCCGCTGCCGGTGCGCTGGCTGCGCAACGCCGGCCTGCGCCTGGTCG ACCGCCACCACGAGGCCAAGGGCCTGTTCGTCCGCCAGGCCCTGGGCCTGTCCGGCGACCTGCCGACGCTGGCGCGGGTCTGAGGCGCCGCGACTCCGTG TCGCGGCGTGGTGAAACACCCGGTCACAAAGGTCGGCTCCGGGGCTAAATGAGGTTCCTTATCATCTGGAACCTCATTCCGCTACCCAGGAGCCGCCAGC
DNA Sequence for Gene
>PM1_RS26475
ATGTCGGTACGCAAAGGCCTTCTCGCTTCCCTCGCCCTCACCGCACTGGCCGGCACCGCCCAGGCCGCCGACGAGGTGGTGGTCTACTCCTCGCGCATCG ACGAGCTGATCAAGCCGGTGTTCGACGCCTACACCAAGAAAACCGGCGTGCAGGTCAAGTTCATCACCGACAAGGAAGCGCCGCTGATGGCGCGGATCAA GGCCGAGGGCGCCAACACCCCGGCCGACCTGCTGCTCACCGTGGACGCCGGCAACCTCTGGCAGGCCGAGAAGATGGGCATCCTGCAGCCGTTCGATTCG CCGACCCTCGACGCCAACATTCCCCCGCAGTACCGCTCCGGCACCGACAGCTGGACCGGCCTGTCGCTGCGCGCGCGGACCATCGCCTACTCCACCCAGC GGGTGAAGCCGGAGGAACTGAGCACCTACGAGGCCCTGGCCGACAAGCAGTGGGAAGGCCGCCTGTGCCTGCGCACGGCGAAGAAGGTCTACAACCAGTC GCTGACCGCCACCCTGATCGAGACCCACGGCGAGCAGAAGACCGAGCAGATCCTCAAGGGCTGGGTGGGCAACCTGGCCACCGACGTGTTCTCCGACGAC ACCGCGCTGCTCCAGGCCATCGCCGCTGGCCAGTGCGACGTCGGTATCGTCAACACCTACTACTACGGGCGCCTGCACAAGCAGAAGCCGGACCTGCCGG TGAAGCTGTTCTGGCCGAACCAGGGCGACCGCGGCGTGCACGTCAACCTCTCGGGCATCGGCCTGACCAGGCACGCGCCGCACCCCGAGCAGGCCAAGGC CTTGGTGGAGTGGATGACCGGCCCCGACGCCCAGGCGCTGTTCGCCTCGCTGAACCAGGAGTTCCCGGCCAACCCGAAGGTCGCGCCCTCGGAGGAAGTG GCGGCCTGGGGCAACTTCAAGGCCGACAGCATCCCGGTGGAAGTCGCCGGCAAGCGCCAGGCCGAAGCCATCAAGCTGATGGACCGGGCCGGTTGGAATT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCAGGAGCCGGAAGCCGGAAGCTGGAGGCTGGAGGTCGGCGTGGACCTGGCTTCCAGCTTCCAGCTTCCGGCTTCTAGCTTCCAGCTAATCACTTATGCG CTGGTACCCCATCACCTTCTCCATCGCCGCCCTGGTGGCGTTGCCGCTCGTCGTGCTGGCGCTGAGCTGGGGCGAGATCGACACGGAAATCTGGGCGCAC CTGTGGGACACCCAGCTGCCGCGCCTGCTGGGCAACAGCCTGGTGCTGGTGTTCGGCGTCGGCATCGGCGTGACCCTGCTGGGCACCAGCCTGGCCTGGC TCACCGCGCTCTGCGAGTTCCCCGGGCGGCGCTGGCTGGACTGGGCGCTGATGCTGCCCTTCGCCATCCCGGCCTACGTGCTGGCGTTCGTCTTCGTCGG CCTGCTGGACTTCGCCGGGCCCTTGCAGACGCTGCTGCGCGAATGGTTCGGCAGCGGCCTGCGGCTGCCCCGGGTGCGTTCCACCGGCGGGGTGATCCTG
Amino Acid Sequence
>binding protein component of ABC iron transporter
MSVRKGLLASLALTALAGTAQAADEVVVYSSRIDELIKPVFDAYTKKTGVQVKFITDKEAPLMARIKAEGANTPADLLLTVDAGNLWQAEKMGILQPFDS PTLDANIPPQYRSGTDSWTGLSLRARTIAYSTQRVKPEELSTYEALADKQWEGRLCLRTAKKVYNQSLTATLIETHGEQKTEQILKGWVGNLATDVFSDD TALLQAIAAGQCDVGIVNTYYYGRLHKQKPDLPVKLFWPNQGDRGVHVNLSGIGLTRHAPHPEQAKALVEWMTGPDAQALFASLNQEFPANPKVAPSEEV AAWGNFKADSIPVEVAGKRQAEAIKLMDRAGWN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site