Pseudomonas sp. M1, PM1_RS24450
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd13553 | PBP2_NrtA_CpmA_like | IPR044527 | Nitrate/bicarbonate ABC transporter substrate-binding domain | 43 | 263 | 1.61089E-87 |
| SUPERFAMILY | SSF53213 | LigB-like | - | - | 243 | 360 | 8.89E-5 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 42 | 276 | 3.1E-35 |
| PANTHER | PTHR30024 | ALIPHATIC SULFONATES-BINDING PROTEIN-RELATED | - | - | 19 | 377 | 1.9E-44 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 40 | 132 | 1.1E-19 |
| Pfam | PF13379 | NMT1-like family | - | - | 39 | 279 | 3.8E-45 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 145 | 375 | 6.7E-33 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.