Pseudomonas sp. M1, PM1_RS24280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCCGGTGGCGGTGAAGAAGGCCGGGATGCCGGCGCCGCCGGCGCGCAGTTTCTCGGCCAGGGTGCCTTGCGGGGTGAGTTCCACTTCCAGTTCGCCGGA CAGCAGCTGGCGTTCGAACAGTTCGTTCTCGCCGACGTAGGAGGCGATCATCTTGCGGATCTGCCGGTCTTCCAGCAGCACGCCCAGGCCGAAGCCGTCG ACGCCGCAGTTGTTCGACACCACCGTCAGGCCCTTCACGCCCAGGCGGCGGATCTCGGCGATGAGGTTCTCGGGGATGCCGCACAGGCCGAAGCCGCCCG CCAGTACCGTCATGCCGTCGGTGAGCCCGGCCAGGGCCTCCGCGTAACTGCCAACCCGCTTGTCGAGTCCTGCCATCTGCTGCTGCCTCTCTTGTAGTTT GGGTTTCCGACCGGCCGGTCGGAGAGCGTCTGCAGCTTCACCGCTGGGGACTGATTTGTTAAGTTTGTTTTTCCAATCGATTATTCGGCTTTTCTTATCA
DNA Sequence for Gene
>PM1_RS24280
ATGACCGTCAAGCAACTGCGCGCCTTCCTCGCCGTGGCGCAGAGCCTGAGCTTCGCCCAGGCCGGCGAGCGCCTGCACCTGTCGCAGCCGGCCCTGAGCC TGGCGATCAAGAACCTGGAGGAATCCCTCGGCGGGCAGCTGCTGGTGCGCACTACCCGCAGCGTCGCCCTCACCCCCGAGGGCGAGACCCTGCTGCCCAT CGCCCGGCGCCTGCTGGCCGACTGGGACAACGCCGAGGAACTGCTGCGCCAGCACTTCACCCTGCAACTGGGCAAGGTCTCCATCGCCGCCATGCCCTCC TTCGCCGGCAACCTGCTGCCGGGCGCGCTCATGGCCTTCCGCCAGCGCTACCCGAAGGTGAACGTGGCGGTGCACGACGTGATCAACGAACAGGTGCTGG AGATGGTACGCAACCGCCGCGTCGAGCTGGGCATCGCCTTCGAGCCGGACAGCCTCGACGGCCTGAGCTTCCAGGCCTTCTACAGCGACCGCTTCGTCGC CGTGCTGCCGGCCGGCTCGCCCCTGGCCGGGCAGCGCCGGCTGACCTGGGCGCAGTTGCTGGAGCAGCCCTTCATCACCCTGCAGCGGCCCTCGGCGGTG CGCCTGCTGCTGGAAGATAGCGTGGCGGCCAGCCACGGCAAGCTGGCGGTGGCCTTCGAGAGCCACCAGTTGGTCACCGTCGGGCGCATGGTCGCCCAGG GGCTGGGGGTGAGCGCAGTGCCGCGCCTGTGCGTGAAGCAGATGGAGGAGCTGGGCGCGCGCTGCGTGGACCTCTACGAACCCACGGTGGAACGCCGCGT GGGCCTGTTCAGCCTGGCCGAGCACAAGCTCTCCAGCGCCGCCCAGGCGCTGAGCGACGTGCTCTTGCAGATAGCCGACTGGCCACGGTTGCAGAAGGAA GGTTGCGAGGAAGGCCGAGCAGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGAGTCGCGCGGCGCGGGCGGCGGAAGAACGCCGCCCGTTGCGCTGGGAGGGTCAGATGTCGCTGCACATCTCGGTCTGGCGCAGGTACTCGAGCAC GTGGACCTGGCCCTTGGAGTCGGCGTAGGTCATTTTCGCCGGGGCGACTTCGCAACGGTCGTTGGCTTGCTCGATACTGATCACCTTGGCCACATCGAGC TGCATGCCGTAGTGGTAGACCACGGGCGCGGCGTCGGCGGCATTGGCGGCCAGGGCGGCGCCCATCAGGGGGATGGCGAACAGGCTGAACAGGGTGCGTT TCATGGTGGGATTCTCCGGTTTCCGGCGTGCTGGCCATTTGGCCTTGCCGTGTATACAAATTTAGTTGAACGGCCGTTCCGGACACAGAGGCAATACGAC AAGGGATTACTGCGCAACACGTAACAATAAGGGCTTGCCAACCTGGCTGAATGGATTGACCGCCCTTTCACCTGCGGTAAAAAGCCCCTGGACTGGCAGG
Amino Acid Sequence
>transcriptional regulator
MTVKQLRAFLAVAQSLSFAQAGERLHLSQPALSLAIKNLEESLGGQLLVRTTRSVALTPEGETLLPIARRLLADWDNAEELLRQHFTLQLGKVSIAAMPS FAGNLLPGALMAFRQRYPKVNVAVHDVINEQVLEMVRNRRVELGIAFEPDSLDGLSFQAFYSDRFVAVLPAGSPLAGQRRLTWAQLLEQPFITLQRPSAV RLLLEDSVAASHGKLAVAFESHQLVTVGRMVAQGLGVSAVPRLCVKQMEELGARCVDLYEPTVERRVGLFSLAEHKLSSAAQALSDVLLQIADWPRLQKE GCEEGRAE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site