Pseudomonas sp. M1, PM1_RS24115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGGCCGCCCGGTGGCCCTGGCCCTGCTCGACGCCTTCGGCAAGCGCACCCACGTGGCCGACGCCGCGCGCATCCGCCGCTGGGTGGAAACCGGCAAGGC CTCGCCGGTGCCGGCGGTGGCGCTGCGTTACAAGCAGGCGAAGCAGACGCAGGGGATGCAGGCGGCGGAGTGATGGTGTTTCCCGGGGGTTTGGGTGTTC GGGATTGAGAGCGCCCTCTCCCTAACCCTCTCCCTGAAGGGAGAGGGGACCGTTCGGAGTATGTTGGTGTTTCGGCGTTAGCCGGCTAGCACAGAGACTG CCGGCTGAAACCTGGCCTTCTCTCGGCACGGACTAGCCCCCTCTCCCTTCAGGGCGGGGCGCGCAGCCGAGGGCTGGGGAGAGGGTTACGGGCTCCCTCG CCACACCAGAGCCCAACCCATACTCCGCCCTTCCCTACTGACCCACCTCCCACATCCCGGTACAGTGCCCGCTCAAAGCCCCCCAAGCACCAGGCCGCCC
DNA Sequence for Gene
>PM1_RS24115
ATGCACGACAACTCCCCCCTCACGGACTACCAGAGCGTCCGCCAGCTGGCGATCCGCTCGCTGTTCGAGATCTTCGAGCAGTTCAGCGAGGGCACCGTGA TCGTCGACCGCGACGCCAATATCGTCTGGATCAACCAGCGCTATGCCCAGCGCTTCGGCCTGGACGAGGCCGAGCAGGCCGTCGGCCGGCCAGTGGAGAG CGTGATCCCCGGCAGCCTGATGCGCGAGGTGGTGCGCAGTGGCCGGCCGATGCTGCTGGACATCCTCGACATGCCGCGCGACCCGCTGGTGGTGATGCGC ATGCCGATCCGCGACGATGCCGGGCAGGTCATCGGCGCCATCGGCTTCGCCCTGTTCGACGAGCTGCGCTCGCTGTCGCCGCTGCTCAGCCGCTACCAGC GCATGCGCCAGGAGCTGGCCTCCACCCGCTCGCTGCTGCAGGCGCGCCAAGCCAAGTACAGCCTGGCGCACTTCATCGGCAACGGCAGCGCCAGCCTGGA GGTCAAGCGCCGCGCCCGCCGCGCCGCCACCAGCGAGGCGCCGGTGCTGCTGCTGGGCGAGACCGGCACCGGCAAGGAGCTGCTCGCCCACGCCATCCAC AGCGCCTCGGCGCGGGCCGGCAAGGCCTTCGTCAGCATCAACGCCGCGGCCATTCCGGAAACCCTGCTGGAGGCGGAATTCTTCGGCACCGCGCCGGGCG CCTTCACCGGCGCCGACCGCAAGGGCCGCCCGGGCAAGCTGCAGATCGCCCAGGGCGGCACCCTGTTCCTCGACGAGATCGGCGACATGCCCCTGCCGCT GCAGAGCAAGCTGCTGCGCGTGCTGCAGGAAAAGGAATTCGAGCCGGTAGGCTCCAACGAAGTGCTGCGCAGCGACGTGCGGCTGATCGCGGCCACCTCC ATCGACCTGGACAAGGCCGTGCGCGAGGGCCGCTTCCGCGCCGACCTGTACTACCGCATCAACGTGGTACCCATCGGGATACCGCCGCTGCGCGAGCGCC TGGAGGACCTGCCGGCGCTGTGCGAGGCGATCCTCGACGACCTGCGCGAGGACAACCACGCCCTCTACGAGCTGGACGCCGACGCCCTCGCCCTGCTGCG CCGCCACGCCTGGCCGGGCAACGTGCGCGAGTTGCGCAACCTGCTGGAGCGCACCGTGCTGCTCAACGACCGGGCGCAACTGGACGCCCAGGCCCTGCGC GCCGCCCTCGGCCCGCTGCAGGCGCCGCCGGCGCAAACGGACGGCAACCGCGCCAGCCTGGCCGAGGGCCAGGACTTCTACGCCGCGCGCGAAGCCTTCG AACGCGAGCTGATCGGCAACGTGCTGGCCGAACAGGCCGGCAACGTCGAGGCGGCCGCGCGGCGCCTGGGGCTGGGCCGCTCGACGCTGTACAAGAAGAT GGCCGCCCTGGGCCTTTCGTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATAGAGACTTTTCTATATTCAGAGACAACCCGGATTCCACGCGCCTTCAGGTACATGGCAACCGTCTTTGTCCACGAATGGAGACAAAGCCCGGCGCAC GCTTTCCGCAAACCAAAATAAATCCCTTTAAAATCAACTAGTTAAACATCTGGCACGGTTCTCGCTATCCGGCCCGAGCGGCCATCCGCCGCACGCCGAC ATAACAACAACCAACGCCGTCCGCGCACGAACGTTACCCACGGGGCCCACGGCCCGCCCCGGTTCGCCGCCGCGCCGCGCCAGGAGTACTAGCAAACATG AGCAGAACCCCGCTCAACCATGCCGTCGCCCTCGCCACCCTGGGCTCCACCCTCGGCATCGCGCTCCCCGTCCAGGCCGATTTCCTCGCCGACAGCAAGG CCAGCCTCGAACTGCGCAACTTCTACTTCAACCGTGATTTCCGCCAGGACGCCGCGCCCCAGTCGAAACAGGAGGAATGGGCGCAGGGCTTCCTGCTGCG
Amino Acid Sequence
>Fis family transcriptional regulator
MHDNSPLTDYQSVRQLAIRSLFEIFEQFSEGTVIVDRDANIVWINQRYAQRFGLDEAEQAVGRPVESVIPGSLMREVVRSGRPMLLDILDMPRDPLVVMR MPIRDDAGQVIGAIGFALFDELRSLSPLLSRYQRMRQELASTRSLLQARQAKYSLAHFIGNGSASLEVKRRARRAATSEAPVLLLGETGTGKELLAHAIH SASARAGKAFVSINAAAIPETLLEAEFFGTAPGAFTGADRKGRPGKLQIAQGGTLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNEVLRSDVRLIAATS IDLDKAVREGRFRADLYYRINVVPIGIPPLRERLEDLPALCEAILDDLREDNHALYELDADALALLRRHAWPGNVRELRNLLERTVLLNDRAQLDAQALR AALGPLQAPPAQTDGNRASLAEGQDFYAAREAFERELIGNVLAEQAGNVEAAARRLGLGRSTLYKKMAALGLSS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site