Pseudomonas sp. M1, PM1_RS30265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. M1 PM1contig_004, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGGCGTCGGGGCCGCTCCACATCTCCGGCCAGCCGAAGATCGCCAGGGCCGCGCCGGACAAGCGGCCGCGCCCGGCCTTGACCAGGTCCAACTGCGAGGG GCCGTCGCGGTCGGCCTCGTGGCCTTCGGTGCCGAAGTCCAGGGGGACGGTCACCCGGCTGTCGAAAGACAGGATGCGCTCGTGCAGCGCCTCGGCGTGG GCCATCACCTCGCGCGGGTAGGGCTGGGCGCGGGCCAGCAGCAGCCAGGCCGCGGCGCCCGCCACGAGGACCAGTACGAGCAGGGGCAGGGTGAGCCAGA GGATCTTTTTCGTGCGGGTGCTAGTCATTGCCGTCCCAGTCAGCGTTGGAGTCGGATGGCAGCCCGGGGCAGGGCATCGCCTGTGGGGGAGGACGAGGCG TGCGGGCGGAAATTTAGCGCCGGCGCACCGCTAAATTTGCCGCCGGGCCGACCGTTCTAGCCTCGGTACAGCCTGCTTGGCGACGGACACAGGACGGACG
DNA Sequence for Gene
>PM1_RS30265
ATGACGGTTTCTCGACGCGGTTTCATGGCGGCCCTGGCGGTGACGGGGGCGGCGGCGTTGCCGACGGCGGCTTACTTCGGCTACCGCGAACTGCAACGCC GCGAGCTGGACGCGCGGGAGCCGGAGACGCCCGGCGAAGCCAGCCTGGAAACCAGCGCCGGCGCCGAGCTGCGCCTGGCCGACCGCCTGCGCGGCATCTG GGACCTGCGCCTGCTCGATGCCGGGCCCGGGCTGCCGGGCCTGCCCGCCGAAGGCCTGCAGTTGATCCTCGACTGCGGCCCACGCGGGCGCGGGCTGATC GGCTGGCTGGACACCCCCGAGCGCCTGCGCGGCACGGAACCGCCGCGCTACCGGGTGCTCGGCGACCTGGTCGGCGCCAGCTCGGCGAACATCCGCTGGC GACTGCTGGGCGAAGGCAACACGCCCAGCCACGAATGCAGCGCTGTGTTCGACGAGGTGTGGGACAACTTCGCCAACGCCGGCGACGGCACCCTCAGCGG CCGCCTCCAGCGCCTGGACCGCGACCTGTCCCTGCCGCAGCAGGACTGCCGCTTCGTCGCCAGGAAGCAGCCCTTTCCCCTGGCCCGCGAGCGCCTGCCG CTCAACGAGGCGCTGCTGGCCTGGCTGGTGTCGCCGCAGCACCGCCTGTTCCACCAGCTCTGGCATGCCTCGCGGGACAAGTGGCACCACCTCGACGAGG CCCAGCGCAACGCCCTGCGCGGCGTGGGCTGGCAGCCCGGGCCGCTGGACGCCGAACGCGACGCGCGCGGCCGGCACAAGGACCGCAACGCCTCGGGCAT CGACTTCCTCTTCATGCACCGCCGCATGCTGGCCAAGGCCCGTTCGCTGCAGGACCTGCCGTCCTGGCAGCGCCTGCCGCCGCCGGCGGTGCCGCTGGAA TACGACCGCGCCGGCTTCATCCGCTACTTCGAGAACGCCGACGGCTGCTCGGTGCCGCCGGCCTGGGTGGCGGTGGACGATGACGAATACAGCCAGTGGC TGCGTGGCCTGAAGAGCGCCGATGCCTACCACGGCAATTTCCAGGTCTGGGAGTCGCAGTACCAGGACCCGGCCTACCTGGCGAAGCTCACCCTGGGCCA GTTCGGCTCGGAGCTGGAACTGGGCCTGCACGACTGGCTGCACATGCGCTGGGCCAGCGTGACGCGCGACCCGTCCAACGGCGCGCCGCTGATGACCGAC CGCAACTACGCCGACTTCGCGCCGCGCTGGTTCCTGCGCGAGAACGACTTCCTCGGCGACCCTTTCTCGTCCCACGTGAACCCGGTGTTCTGGTGCTTCC ACGGCTGGATCGACGACCGCATCGAGGACTGGTTCCGCGCCCACGAGCGCTTCCACCCCGGCGAGGTGCGCCGCGCCGAGGTGCTGGGCATGCCCTGGTT CGCCCGCGGCCGCTGGGTGGAGATCGACGACCCCTGGCTGGGCCCATCCACCCACGGCTGCGGCCTCTCCGACCTGCAGGCGAGCAGCAGCGACCTGGCC CTGGACGTGGAGACCATGAAGCTGGCGTTGCGCGTCATCCTCACCGAGGACGACGAGCGCAAGGGCTGGCTCAAGCGCGCGCCGCGGCGGCCGTGGTACG CGCGCAACCTGAAGCTGGCGGAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGGTAGATCGCAGAAAGACACGGCGGGCCTGATTGCATCAGACCTGAGAAGTGGTTGAAAGCGCCTATGCGCCGTCCTGTTCTTCATCCCATAGCCAG AGCACATGGCCCTTGGCGAGGCCGCGCGGCACTTCGGGGAAAATCTCGCCCTGCTGGAAGTGGCGGCGCGAATCGTGCTGAGCGAGGGTGAACCAGAAGC CGGCACGTGGGCAGGGCTGGCCAGCGTAAACAGGTGGCACGGGCAAGGGGCCGAGTCCTTCTTCGAAGGGTACGGTTTCACCGGGTATACGTTCGACCAG GGTCCAGAGGGTTGGCTGCTTGGAGGCACATTGAAAACCGCTAGGGCTCAAACCGACCCTGGTTTCAGGAGCATTGCGTGGATAGGTAGTGAAGTGTTGG GAGGCGATCAGGAACTGTGCGCATGAATCATCCAAGTTCGGAAGATAGACACCCGTCTGTGGAACCGGCTCTCCAGTACAGACCTGTACCTGGGAATTCA
Amino Acid Sequence
>protein PvdP
MTVSRRGFMAALAVTGAAALPTAAYFGYRELQRRELDAREPETPGEASLETSAGAELRLADRLRGIWDLRLLDAGPGLPGLPAEGLQLILDCGPRGRGLI GWLDTPERLRGTEPPRYRVLGDLVGASSANIRWRLLGEGNTPSHECSAVFDEVWDNFANAGDGTLSGRLQRLDRDLSLPQQDCRFVARKQPFPLARERLP LNEALLAWLVSPQHRLFHQLWHASRDKWHHLDEAQRNALRGVGWQPGPLDAERDARGRHKDRNASGIDFLFMHRRMLAKARSLQDLPSWQRLPPPAVPLE YDRAGFIRYFENADGCSVPPAWVAVDDDEYSQWLRGLKSADAYHGNFQVWESQYQDPAYLAKLTLGQFGSELELGLHDWLHMRWASVTRDPSNGAPLMTD RNYADFAPRWFLRENDFLGDPFSSHVNPVFWCFHGWIDDRIEDWFRAHERFHPGEVRRAEVLGMPWFARGRWVEIDDPWLGPSTHGCGLSDLQASSSDLA LDVETMKLALRVILTEDDERKGWLKRAPRRPWYARNLKLAER
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site