Pseudomonas syringae B576, NG81_RS03855

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain B576 contig_6, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTCACCGTTGGCCTGTAGCGTGCTCAGCAGACCATCCTGCGAGAACTGCTTCATCTTCAGCGCGTACTCGATGGCTTCGCCGTCGCCGCCCAGTTGTGG CGCGTTCTCTGTGCCAGTGATCGGCAGGACTTCGATGTAGAGGTCGTCGGTCAGACGCTGATTCAGGCGCAACTCTTCTTCGCAGAAATGCTTGCGCAGG GCCAGCGTGGTGAAATCCAGAAAGCCGAAGTTCATCGGCTTTTTGAATTTGTAGGCATACGGACCCGTCAGCAGCACCCAGGAAATGTGCGTTTCGATGA CCTGGAAACTCTCCACCGGATGGGGGAAGAGGGCAGGGTTCTGCAGGGCAGCAATCAAAGACTGGCTCACGGTCGATCCTTCAGGAATGTGTTCAAAATG TAAGTACACGATGCTGCCATTATGGCCGCTTGGCGCGAGGCTGCAAACCGCTGGCTCGGGCGTCTGTCGATCCTCGGTAAAGTGCGTATAATCCGCGCCC
DNA Sequence for Gene
>NG81_RS03855
ATGACTCGATCCCGCACCTCTCGTTCTGCAAAAAAACAACCTCCCCGCAGCCTTAACAAGTGGCTGGGCTGGGCGTTGAAGCTCGGTATTGTCGGCCTGG TTCTGCTCGGCGGCCTGGCCATTTATCTCGATGCAATCGTCCAGGAAAAATTCTCCGGCAAGCGCTGGACCATCCCGGCCAAGGTCTATGCACGGCCGCT GGAGCTGTTCGTTGGACAGAAGCTGAGCCGCGATGACTTTCTCATCGAGCTCGACGCCCTGGGCTATCGCCGCGAAAGCGTGGCGAACGGGCCCGGCGCC GCAGCGGTGAACGGCAATACCGTCGACCTCAACACGCGTGGTTTTCAGTTCTACGAAGGCACTGACGCAGCGCAGCAGGTGCGCGTGCGCTTTTCCGGTG ACTACGTAGCTGACTTGTCTTCGGGCAATGGTGCAAAGCTTGCGGTGGCGCGGCTTGAGCCGTTGCTGATCGGCGGCCTGTACCCGAAGAACCTGGAAGA CCGGATTCTGATCAAGCTGGATCAGGCGCCGCCCTATCTGCTCGACGGGCTGGTAGCGGTCGAGGACCGGGATTTCTATCACCACTTCGGCGTGTCGCCC AAGTCCATTGCCCGGGCGATCTGGGTCAATACCTCGCAGGGGCAGATGCGCCAGGGCGGCAGTACGCTGACCCAGCAGTTGGTCAAGAACTTCTACCTGA CCAACGAGCGCAGCCTGACCCGCAAGCTGACCGAAGCCATGATGGCCATTTTGCTGGAGATTCATTACAGCAAGCAGGAAATCCTTGAGGCCTATCTCAA CGAAGTGTTCGTCGGGCAGGACGGCCAGCGTGCTGTTCACGGTTTCGGTCTGGCCAGTCAGTATTTCTTCAGCCAGCCGCTGTCCGAACTGAAAATCCAT CAGGTGGCGATGCTGGTCGGTCTGGTCAAAGGGCCGTCCTTCTACAACCCGCGTCGTAATCCGGAGCGTGCTCTGGAGCGTCGCAATCTGGTGCTCGATC TGTTCGAGCAGCAGGGCGTCGCCACGCCGGAAGTGGTTGCCGCTGCGAAGAAAATGCCGCTGGGTGTGACCAAGACCGGGACCCTCGCCGACAGCTCGTT CCCGGCGTTCCTCGATCTGGTCAAGCGTCAGCTGCGCGAAGACTATCGCGACGAAGACTTGACCGAAGAAGGGCTGCGGATCTTTACCAGTTTCGATCCG ATCCTGCAGATGAAGTCCCAGGCTGCCATGGACGATACGTTCAAGAAGCTCGCCGGGCGCAAGGGTTCTGATGAGGTGGAGTCGGCCATGGTCGTCACCA ACCCGGAAACCGGCGAAGTGCAGGCGTTGATCGGTGGGCGTGAGGCCGGGTTCTCGGGCTTCAACCGGGCGATCGACGCGGTTCGGCCGATCGGCTCGCT GGTCAAGCCGGCTATTTACCTGACGGCACTCGAACGGCCAAGCCAGTACACCTTGACCAGCTGGATCGCCGACGAACTGTTCCAGGTCAAGGGTGCCGAT GGCCAGATCTGGAAACCGCAGAACTACGATCACAAGTCACACGGCAATATCTTCCTGTATCAGGGGTTGGCGCATTCTTACAACCTGTCGACCGCCAAGC TGGGTCTTGAGCTGGGCATTCCAAACGTGTTCAAGACTCTGGCCAAGCTGGGTGTGACGCGCGAATGGCCGACCTATCCGTCGATGCTGCTGGGTGCGGG TGGCTTGAGTCCGATGGAAGTGGCCACCATGTATCAGACCATCGCCAGCGGCGGGTTCAATACGCCGATGCGTGGTATTCGCAGCGTGCTCACCGCTGAA GGCGAGCCGCTCAAGCGTTATCCGTTCCAGATTGAACAGCGCTTCGATCCGGGTGCCATATACCTGGTACAGAATGCGATGCAGCGGGTCATGCGCGAAG GTACAGGCAAATCTGTTTACAACGTGTTGCCGAGCTCGTTGAATCTGGCGGGCAAGACCGGCACCAGTAACGACTCGCGCGACAGCTGGTTTGCCGGGTT CAGTCAGGACCTGCTGGCCGTTGTGTGGATGGGTCGCGACGACAACGGCAAGACACCGTTTACCGGTGCCACCGGTGCCCTGCAGGTCTGGACCAGTTTC ATGCGCAAGGCTGGTCCGCTGCCGCTGGACATGGCGATGCCAGACAACGTCGTTCAGGCGTGGGTCGATGCGCAGACCGGTCAGGGTTCGGATGCAAGCT GCCCGAATGCCGTGCAGATGCCGTATATTCGCGGCAGTGAGCCCCAGCCTGGCGCGACATGCGGCGGCGCTCCGGCACCTGCCACTGAGGTGATGGACTG GGTCAAGGGTTGGTTGAACTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAATCGAGGTTTTGAAGTGAATAAATGGTGGATTCCAGCTTTAACGGCACTGGCCTTGCTGAACGGCTGCGCCAGTGTGGAACGCGGCTCGATTCCGGT CGTGGATTCGAGCTCCAAGGTGTCCAACGGCGAACGTGCGGCAGCTTCGCGTCGCACCAACACCGCTCCGGTGCAACAGCAGCCGCAAGCTGTACCGCAG GACTCGGGCGTGGTGGTGATGGTGCCGGGCGCGGGTGGCGCTGATGCAGGACAGAGTTATTCTGCGCCCGCCAGTCAGGCACCGTTCAGTGTCAACACTC CGCCTGTCGATGCCGCTCCTGTCAATCAGGCCCCGGTCAGTCAGGCTCCCGCGAACAACAGTTACAGCATGCCGGCCGCCTCTGCCCCGACCGGAATTCC GTCCAGCGGTGGCGGTCTGTCAGAGGACGAGCAACTTGACGGGCCTGTACTGGCATTGCTGACCACTGCACAGCAACAGCAGACCAGTGGCGATCTCAAC
Amino Acid Sequence
>penicillin-binding protein
MTRSRTSRSAKKQPPRSLNKWLGWALKLGIVGLVLLGGLAIYLDAIVQEKFSGKRWTIPAKVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGA AAVNGNTVDLNTRGFQFYEGTDAAQQVRVRFSGDYVADLSSGNGAKLAVARLEPLLIGGLYPKNLEDRILIKLDQAPPYLLDGLVAVEDRDFYHHFGVSP KSIARAIWVNTSQGQMRQGGSTLTQQLVKNFYLTNERSLTRKLTEAMMAILLEIHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSELKIH QVAMLVGLVKGPSFYNPRRNPERALERRNLVLDLFEQQGVATPEVVAAAKKMPLGVTKTGTLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDP ILQMKSQAAMDDTFKKLAGRKGSDEVESAMVVTNPETGEVQALIGGREAGFSGFNRAIDAVRPIGSLVKPAIYLTALERPSQYTLTSWIADELFQVKGAD GQIWKPQNYDHKSHGNIFLYQGLAHSYNLSTAKLGLELGIPNVFKTLAKLGVTREWPTYPSMLLGAGGLSPMEVATMYQTIASGGFNTPMRGIRSVLTAE GEPLKRYPFQIEQRFDPGAIYLVQNAMQRVMREGTGKSVYNVLPSSLNLAGKTGTSNDSRDSWFAGFSQDLLAVVWMGRDDNGKTPFTGATGALQVWTSF MRKAGPLPLDMAMPDNVVQAWVDAQTGQGSDASCPNAVQMPYIRGSEPQPGATCGGAPAPATEVMDWVKGWLN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site