Pseudomonas syringae B576, NG81_RS02450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain B576 contig_4, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCTGTTGGAAACGTTTCTCCGGAAACGCTTCCTTGCACAAAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTAC CAGCAAGCTGTTGGTGATACTGGTTCGCCAGAAGTGCAAGTTGCACTGCTGACCGCCAACATCAACAAACTGCAAGGCCACTTCAAGGCCAACGGTAAGG ACCACCACTCGCGTCGTGGTCTGATCCGTATGGTAAACCAGCGTCGCAAGCTGCTGGATTACCTGAAAGGTAAGGACGTTAGCCGTTACAGCGCCCTGAT CGGTCGTCTGGGTCTGCGTCGCTAATAACGACGTTGCTAGAGGTTGGTTGTCTGTCACGATCCGTCGGGTTTTCCCGGTGGTTCTGGCAGGCTCCCAGCC TCAAGTTTTATCTGGGCTGTGGAAGGGGCCGATTCCCCACGCTGCCCAAGAATTCGCAAGAAACCAGTTCCCCAAGAGCCACAAAGAAAGGTAGGAAACC
DNA Sequence for Gene
>NG81_RS02450
GTGAACCCGGTAATCAAAAAGTTTCAGTTCGGTCAATCGACCGTAACCCTCGAGACAGGCCGTATCGCCCGTCAAGCCTCTGGTGCAGTATTGGTCACCG TTGACGACGACGTCAGCGTACTCGTGACTGTGGTCGGCGCCAAACAGGCTGACGCTGGCAAAGGCTTCTTCCCTCTGTCCGTGCACTATCAGGAAAAAAC CTACGCTGCCGGCAAGATTCCTGGTGGTTTCTTCAAGCGTGAAGGCCGTCCTTCCGAGAAAGAAACCCTGACTTCGCGCCTGATCGACCGTCCGATCCGC CCGTTGTTTCCAGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTCGTCTCCACCAGCAAGAAAATCGATCCGGACATCGCTGCGATGATCGGTA CTTCGGCTGCCCTGGCCATCTCCGGTATCCCGTTTGACGGTCCGGTCGGTGCTGCCCGCGTTGCTTTCCACGAAAGCACCGGCTACCTGTTGAACCCTAC TTACGAGCAGCTGCAGGCTTCGAGCCTGGACATGGTCGTTGCCGGTACTTCCGAAGCCGTTCTGATGGTTGAGTCGGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCTGTGCTGTTCGCGCATGACGAGTTCCAGGTCGTGATCAACGCCATCAAGGAACTGGCTGCCGAAGCCGCCAAGCCTACCTGGGCCT GGCAGCCTAAGCCTGAAGCGACTGAACTGCTGAGCGCTATCCGCTCCGAGTTCGGCGAAGCGATCTCCCAGGCTTACACCATCACCGTCAAAGCCGACCG TTATGCGCGTCTGGGCGAGCTGAAAGATCAGATCGTTGCCAAACTGGCCGTGGAAGAAGGCAGCCCGTCTGCCAGCGAAGTCAAAGCCGCTTTCGGCGAA ATCGAATACCGCACCGTTCGCGAAAACATCGTTAACGGCAAGCCGCGTATCGATGGCCGTGACACCCGCACCGTTCGTCCTCTGAACATCGAAGTCGGCG TTCTGCCAAAGACTCACGGTTCGGCACTGTTCACCCGTGGCGAAACTCAGGCGCTGGTCGTTGCCACGCTGGGTACTGCACGTGACGCACAGCTGCTCGA TACCCTCGAAGGCGAGAAAAAAGACCCCTTCATGCTGCACTACAACTTCCCTCCGTTCTCGGTGGGCGAGTGTGGTCGCATGGGCGGTGCAGGTCGTCGT GAAATCGGTCACGGCCGTCTGGCCCGTCGCAGTGTCCAGGCCATGCTGCCAGGCGCTGACGTGTTCCCGTACACCATCCGTGTCGTATCGGAAATCACCG AGTCCAACGGCTCCAGCTCCATGGCTTCGGTCTGCGGTGCTTCCCTGGCTCTGATGGACGCTGGTGTGCCGATGAAGGCGCCGGTTGCCGGTATCGCCAT GGGTCTGGTCAAGGAAGGCGAGAAGTTCGCGATTCTGACCGACATCCTGGGTGACGAAGACCACCTGGGTGACATGGACTTCAAGGTAGCCGGTACCTCC AAAGGTGTTACCGCGCTGCAGATGGACATCAAGATCAAAGGCATCACCGAAGAAATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGCCAGATGAACCAGATCATCGGTCAGTCGCGTAACGAACTGTCGGCCAACGCTCCGACCATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTGATCGGCAAGGGTGGCGCAACCATCCGTGCCATTTGCGAAGAGACCAAGGCTTCGATCGACATCGAAGACGACGGCTCGATCAAGATCTTCGGC GAGTCCAAGGAAGCGGCTGAGGCAGCACGTCAGCGCGTTCTGGGCATCACCGCAGAAGCGGAAATCGGCAAGATCTACGTCGGCAAGGTTGAGCGCATCG TCGATTTCGGCGCATTCGTCAACATCCTGCCGGGCAAGGACGGTCTGGTTCACATCTCGATGCTGAGCGATGCTCGCGTAGAGAAAGTGACCGACATCCT CAAGGAAGGTCAGGAAGTCGAAGTACTGGTACTGGACGTGGATAACCGCGGCCGTATCAAGCTGTCGATCAAAGACGTAGCCGCAGCGAAAGCGTCGGGC GTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGATCTGAGCGGTATGTGAAAAAGGGACTCTTCGGAGTCCTTTTTTTATGAGCGCAATTAGAGGCTTACCAATGGAGCATGCAAACTGCTCGGTGCAAA CATGCATCTTGCAAGCCCGGGTTTGCATGAACGGGCAATCTGCACGACTCAGCAAAATAACTAAAAAGTTAACTAATTGATTTTAAACGTTATTTTGACT AGCTTGCTTTTGGCACACCGCTTGCGATATACCAGTTAACCCTGCCACCACATGCTGGTGCAGATTTTGAGAAAAACAGGAGTTATCGTATGAAGAAGTT CGCTATTGCCGCTGCTACCGCTACTGCCCTGACTCTGACCATGGCCAACGCTGCTTTCGCACAGACCTCGGCCCAAGCGCCAATGGTTCTGGCAGCTAAC ACCACTACTCAAGAAGTCAAAGAAGATACTTCTGATACCTGGATCACCACCAAAGTCAAAGCCGACCTGCTGACCGAAAAAGGCATCCCAGGCTCGGACA
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADAGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKIDPDIAAMIGTSAALAISGIPFDGPVGAARVAFHESTGYLLNPTYEQLQASSLDMVVAGTSEAVLMVESEAKELTED QMLGAVLFAHDEFQVVINAIKELAAEAAKPTWAWQPKPEATELLSAIRSEFGEAISQAYTITVKADRYARLGELKDQIVAKLAVEEGSPSASEVKAAFGE IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRSVQAMLPGADVFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILTDILGDEDHLGDMDFKVAGTS KGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQIIGQSRNELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ESKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site