Pseudomonas syringae B576, NG81_RS01650
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae strain B576 contig_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GATGTCGGCTTTCTCGGCGCGGCGCAGGTCGACCGTTTCGGCAACATCAACACCACCGTGGTCGGCGATTACCATCATCCAAAAGTGCGTCTGCCGGGCG CCGGTGGTGCGCCGGAGATCGCCGGGTCAGCCAAGTCAGTGCTGATCATTCTCAAGCAGTCGGCGCGTTCGTTCGTCGACAAGCTGGACTTCATCACCTC GGTCGGCCATGGCGAAGGTGGCGACTCGCGCAAACGCCTGGGCCTGCCCGGTGCCGGCCCAGTGGGCATCATCACCGACCTGTGCATCATGGAGCCGGAA GCCGGCACCCACGAGTTCGTCGTGACCACGCTGCACCCTGGCGTGACCCGCGAGCAGGTGATCGCCGCAACCGGTTGGGCGATCCGCTTTGCCGACACCG TTGTTGTGTCCGAAGAGCCCACTGACGTCGAGCTGACGGCGCTGCGTGATCTGGAAGCACGAACTGCCGCGGCTCATGGTCAGGTCGCAGGAGAAGCGTG
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| DNA Sequence for Gene |
>NG81_RS01650
ATGCGTGATGTATTTATTTGCGATGCGATTCGTACGCCCATCGGTCGCTTTGGTGGCGGGTTGTCTTCGGTGCGTGCAGACGACCTGGCGGCGGTGCCGA TCAAGGCGTTGATGGAGCGCAACCCTTCGGTCAACTGGGAAGAGATCGACGAAGTGTTCCTTGGCTGCGCCAATCAGGCCGGCGAGGACAACCGCAACGT TGCGCGCATGGCCGCACTGTTGGCCGGGCTGCCGGAAAGTGTACCGGGCGTCACCCTCAATCGTTTGTGTGCTTCCGGTATGGACGCCATCGGCACCGCG TTCCGGGCCATCGCGTCAGGTGAAATCGAGCTGGCCATCGCCGGAGGCGTCGAGTCGATGTCCCGCGCGCCCTTCGTGATGGGCAAGGCCGATGCCGCGT TTTCGCGCAACATGAAGCTGGAAGACACCACCATCGGCTGGCGCTTTATCAATCCGGCGATGAAAGCGCAGTACGGCGTGGACTCAATGCCCGAAACGGG CGACAACGTTGCAACCGACTTCAGGATTTCTCGAGCCGATCAGGACGCTTTCGCCCTGCGCAGCCAGCAACGCACTGCCGTTGCCCAGGCTGCGGGCTTT TTCGAGGAAGAGATCGTGCCGGTGCGAGTCGCGCACAAAAAGGGCGAAACCCTTGTCGACAAGGATGAGCATCCGCGTGGCGATACCAGTCTGGAAACCC TGAGCAAACTCAAGCCGGTCAATGGCCCGGACCGCACGGTGACTGCCGGTAATGCGTCCGGAGTCAACGACGGCGCTGCTGCGCTGATTCTGGCGTCGGC CGAGGCGGTCAAAAAGCATGGCCTGACGCCCCGCGCCCGCGTGCTCGGCATGGCCAGCGCGGCGGTTGCACCTCGGGTGATGGGCATTGGCCCGGTGCCA GCGGTGCGTAAACTGGTCGAGCGGCTGGGCCTGGCGGTGACCGATTTCGATGTCATCGAACTCAATGAAGCGTTTGCCAGCCAGGGTATTGCGGTGCTGC GCGAACTGGGTCTGGCGGACGATGCGCCGCAGGTCAATCCCAACGGCGGGGCAATTGCCCTCGGTCATCCGCTGGGCATGAGCGGCGCGCGGCTGGTGCT GACGGCGCTGCATCATCTGGAGAAAACCGGCGGGCGCAGAGGCCTGGCAACCATGTGCGTCGGCGTCGGGCAGGGGCTTGCGCTGGCCATCGAGCGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCTCCCGCTTCAACCTGTTGTCCAGCAACCCGGATCGTTTGTCAGCCTCCACGAAAAGGCAGGCCGATGATCCGGGTTGTTGTTCGTCTGGACGCCCG GATTCTCAACGATCCCGCTATTCCAGTCGGCTGAATTGGCCTGACTTATTGTGCTCGATTAAAGACGGTGTTACAGATTGTTTCTTATGGACAGTTCTGC TTGGGGAAAATAATGACTACAACATCAAAAGCACCGCATTACACCGGCGAGGAGCGAAGCAAAAGAATTTTCGCCATTGTCGGCGCCTCATCCGGCAACC TGGTCGAATGGTTCGACTTTTATATCTACGCCTTCTGCGCGATTTATTTCGCACCGGCTTTCTTCCCTTCCGATGACCCGACCGTTCAGTTGCTCAACAC CGCGGGTGTGTTTGCCGCTGGCTTTCTGATGCGTCCGATTGGCGGCTGGCTGTTTGGTCGTGTTGCAGACAAACATGGCCGCAAGAACTCCATGCTGATT
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| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MRDVFICDAIRTPIGRFGGGLSSVRADDLAAVPIKALMERNPSVNWEEIDEVFLGCANQAGEDNRNVARMAALLAGLPESVPGVTLNRLCASGMDAIGTA FRAIASGEIELAIAGGVESMSRAPFVMGKADAAFSRNMKLEDTTIGWRFINPAMKAQYGVDSMPETGDNVATDFRISRADQDAFALRSQQRTAVAQAAGF FEEEIVPVRVAHKKGETLVDKDEHPRGDTSLETLSKLKPVNGPDRTVTAGNASGVNDGAAALILASAEAVKKHGLTPRARVLGMASAAVAPRVMGIGPVP AVRKLVERLGLAVTDFDVIELNEAFASQGIAVLRELGLADDAPQVNPNGGAIALGHPLGMSGARLVLTALHHLEKTGGRRGLATMCVGVGQGLALAIER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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