Pseudomonas syringae B576, NG81_RS24455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae strain B576 contig_39, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCCGATTCTCATGTGGCTATCCCGAATGACGAGCGTAGCCTGGAAGAGATCCGCGCCAGTGATCTGGTGCCGTTTGCTCGTCTGAGTCAGCAACTGGC TGCAGTGATGCCAGCGCATGTCATTTACCCGAAAGTCGATTCGCAGCCCGCAGGGTTCTCAAGGCGCTGGTTGCAGGACATTCTGCGCCACGAACTGCAA TTTGACGGTGTTATTTTCAGCGATGACCTGTCGATGGCCGGGGCTCATGTCGTCGGTGATGCGGCCAGCCGTATCGAGGCAGCGCTGACAGCCGGATGCG ACATGGGCCTGGTGTGCAACGACCGGGCGGCCGCAGAGCTTGCGCTGGGCGCTGCACAGCGCCTGAAGGTCAAGCCTTCGCCGCGTATCGCGCGTATGCG CGGTCAGGCGTCGGCCAGCACCGACTATCGGCAACACCCGCGCTGGCAGGCCGCGCTCCAGGCTCTGCGCGCTGCTCAACTGATCGATTAAGGATTTGCG
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| DNA Sequence for Gene |
>NG81_RS24455
ATGACTGTTTACGCGATTATTGGCGGTACTGGCCTGACCCAGCTCGAGGGCCTGAATATTCGGCAATCCCTGCCGATGAACACCCCTTATGGCGCACCGT CCGGCGAAATCCAGATCGGCGACTATGCCGGTCGTGAAGTGATGTTTCTGGCGCGCCACGGCCACCCGCACCGCTTGCCGCCGCATCAGGTTAACTACCG GGCCAATATCTGGGCACTCAAGCAGGCAGGTGCCGAAGCGATTCTTGCGGTCAACGCAGTCGGTGGCATTCATCCGGCCATGGGCACCGGGCATTTCTGT GTGCCGCATGATCTGGTCGACTACACCAGCGGTCGTCAGCACACCTTCTTTGCCGATGATCTGGAAGAGGTCACGCACATCGACTTCAGCTATCCGTACA GCGAACCGCTGCGTGCTCGGCTGATTGCGGCGTTGGCGGCAGAGGGATGCGCGTTCTCCGATCGGGGCGTCTATGCCTGTACCCAGGGACCGCGTCTGGA GACTGTTGCCGAAATCATTCGCCTGGAGCGTGATGGTTGCGACATCGTCGGCATGACTGGCATGCCTGAAGCCGCCTTGGCGCGTGAACTGGAGCTTGAA TACGCCTGCCTGGCGCTGGTGGTCAATCCGGCAGCGGGCAAATCGACGACTGTCATTACCATGGCGGAAATCGAACAGGCCCTGCGCGAGGGGATGGGCA AGGTGAAGGCTACGCTTGCCCGGGTTCTTTCGGCGTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTACAGCATGCGCTTGAGGGTATCGTCCTTGCGCACCAGGTGGTGCCCGAGCGCAGCGATCACATGCAGACCGATGACATAGTAAAAGATCGAGCCCAG CAACTTGTGCACGTCTTCGAACGTTTCGGCCAGGTGGTCCGAGGTGGCCAGCGGCCAGGGGATCTGCAGGTCGGTGAGGGGGATGGGCAGTGCGCCTTTC TCCACCATCACCGTCAGCAGGCCCAGTAACGGCTGAGCAAACAGGAACGCATACAGCGTGTAATGGGTCAGGGTTGCGACGATGCGCAACGCCCCTTCAA GCGGCGGTGTAATGCCGGGTGGACGATGACGTCGACGCTCGGCGGCACGGAAAAACGCCATGATCAGAATCAGAATGCCGACCCAGTAATGGCTCTGCAC GACCAGCAAACGGTATTCCGAGCCCTTGCTGAACTGGGTGCGGCTCAGAATCAGGGTGTACGCCAGCACGATCAGAATGGCCATTGACCAGTGCAGCCAC
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| Amino Acid Sequence |
>5'-methylthioadenosine phosphorylase
MTVYAIIGGTGLTQLEGLNIRQSLPMNTPYGAPSGEIQIGDYAGREVMFLARHGHPHRLPPHQVNYRANIWALKQAGAEAILAVNAVGGIHPAMGTGHFC VPHDLVDYTSGRQHTFFADDLEEVTHIDFSYPYSEPLRARLIAALAAEGCAFSDRGVYACTQGPRLETVAEIIRLERDGCDIVGMTGMPEAALARELELE YACLALVVNPAAGKSTTVITMAEIEQALREGMGKVKATLARVLSAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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