Pseudomonas syringae B576, NG81_RS23780 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae strain B576 contig_37, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTCCGGGTTCATGATCGCGCAGGTAACCGCCGCCGCACTGGCCAGTGAAAACAAGGCATTGGCCCACCCGCACAGTGTCGACAGCCTGCCGACCTCGGC CAATCAGGAAGACCATGTGTCGATGGCCCCGGCCGCCGGCAAGCGCTTATGGGAAATGGCAGAAAACGTTCGCGGGATTCTTGCCGTAGAATGGTTGGCT GCCTGCCAGGGTCTGGACTTGCGTGAGGGCCTGAAAACCTCTCCGAAGCTGGAGCAAGCCCGCAGCCTGTTGCGCAGCAAGGTCCCGTTCTATGAAAAGG ACCGCTTTTTTGCACCGGACATCGAAGCTGCCAGTCAGCTGTTGTCCTCCACTTGCCTGAACCCGTTGGTTCCTGCACGTCTGCTACCCAGTCTGTGATG CACCGCGAGCCTGGCAGGGCTCGCTTTGGTCATCGCTGCGGGAGGCCGGATGCAGGCGTTCTCGCAGCTATTGCCATACCTGTAATGAAATGGACCTGAA
|
|
| DNA Sequence for Gene |
>NG81_RS23780
|proY
ATGACGTCACAAGATGGTTTGAAACGCGGGTTATCCGCCCGCCACATCCGCTTCATGGCCCTGGGCTCTGCCATCGGTACAGGGTTGTTCTACGGCTCGG CCTCGGCGATTCAACAGGCCGGGCCTGCTGTACTGCTGGCTTACCTGATCGGCGGCGCGGCGGTGTACATGGTGATGCGCGCGCTCGGCGAAATGGCGGT CCACGACCCGGTGTCCGGTTCGTTCAGCCATTACGCCACGCGCTATATGGGCCCGCTGGCCGGCTTCGTGCTCGGCTGGACCTACGCGTTCGAGATGATC ATCGTCTGCCTGGCCGACGTGACCGCATTCGGCATCTACATGGGCTTCTGGTTTCCGGAAGTACCCCGCTGGATCTGGGTGCTGGGTATCGTCTTTCTGA TCGGCGCGCTCAACCTGTGCAACGTGAAAGTCTTTGGTGAAACCGAGTTCTGGCTGTCGATCCTCAAGGTCAGCGCCATCGTGGCGATGATCGTCGCAGG CTTCGGCATCATGATCTTCGGTATCGGCAGCTCGGCCAGCGGCAGCGAAATCGGCATCAGCAACCTGTGGGAGCATGGCGGCTTCATGCCCAACGGCGTC ACCGGTCTGATCGCCTCGTTCGCAGTGGTGATGTTTGCCTTCGGCGGCATCGAAATCATCGGCATTACCGCAGGCGAAGCGAAGGACCCGCAGCGCAGCC TGCCGCAGGCGATCAATGCCGTGCCGCTGCGCATTCTGCTGTTCTACGTGCTGACACTGTTTGTGCTGATGTGCATCTACCCGTGGCCGCAGATCGGCAC GCAGGGCAGTCCGTTCGTGCAGATTTTCGATAACCTGGGCATCGCTTCGGCGGCGACCATCCTCAACATCGTGGTGATCTCGGCGGCCGTGTCGGCGATC AACAGCGACATCTTCGGCGCAGGCCGCATGATGTATGGCCTGGCCCGTGAAGGTCAGGCGCCCGCCAGTTTTGCCCGCGTGTCGCGCCATGGCGTGCCGT GGATGACCGTGCTGGTCATGGGCATCGCGTTGCTGGGCGGCGTGCTGCTCAACTACCTGATCCCCAAGGATGTGTTTCTGCTGATCGCTTCGCTGGCCAC CTTCGCCACCGTGTGGGTCTGGCTGATGATTCTGCTGACGCAGGTCGCCATGCGCCGCTCGATGAACCGCGAGGAAGCGGCACAGCTGAAATTCGCCGTG CCGTTCTGGCCTTACGGGCCTGCGGCCGCCATCGCCTTCATGCTGTTCATCTTCGGCGTGCTGGGCTACTTCCCGGACAACCGTGCAGCCTTGATCGTCG GCGCAATCTGGATCGTGCTGCTGCTCATCGCCTACGCTGTGTGGGTCAAGCCCAAGGCGCTCAACAACACTCATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAACGAGGCCTGGAATGAAAACGCTCTGGAAAAACTGTCACATCGCAAGCATGGCGCACGGCAAATACTCGATCATCGAGCATGCCGCCATCGTGACCT CCGGAGCGCTCATCGAGTGGATCGGGCCTCAGGCCGAGCTGGCCGAGCCGGAACATGACAACTGCATCGATCTGGGCGGTGCATGGGTCACGCCCGGCCT GATCGATTGTCACACCCATACGGTGTTCGGCGGCAACCGCAGCGGCGAGTTCGAACAGCGTTTACAGGGCGTGAGCTACTCCGAGATCGCCGCAGCGGGC GGCGGTATTGCCAGCACGGTGCGTGCGACGCGCGACGCCAGCGAGGATGAGCTGTACGCCAGTGCCGAGCGCCGTCTGCGGCATCTGCTGAAAGACGGCG TCACGACCGTCGAGATGAAGTCGGGCTACGGGCTGGACCTGGAAAACGAGCGCAAGATCCTGCGGGTGATCCGGCGTCTGGGCAACACCCAGCCAGTCAC
|
|
| Amino Acid Sequence |
>amino acid permease-associated region
MTSQDGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQQAGPAVLLAYLIGGAAVYMVMRALGEMAVHDPVSGSFSHYATRYMGPLAGFVLGWTYAFEMI IVCLADVTAFGIYMGFWFPEVPRWIWVLGIVFLIGALNLCNVKVFGETEFWLSILKVSAIVAMIVAGFGIMIFGIGSSASGSEIGISNLWEHGGFMPNGV TGLIASFAVVMFAFGGIEIIGITAGEAKDPQRSLPQAINAVPLRILLFYVLTLFVLMCIYPWPQIGTQGSPFVQIFDNLGIASAATILNIVVISAAVSAI NSDIFGAGRMMYGLAREGQAPASFARVSRHGVPWMTVLVMGIALLGGVLLNYLIPKDVFLLIASLATFATVWVWLMILLTQVAMRRSMNREEAAQLKFAV PFWPYGPAAAIAFMLFIFGVLGYFPDNRAALIVGAIWIVLLLIAYAVWVKPKALNNTH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|