Pseudomonas syringae B576, NG81_RS20975

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain B576 contig_32, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGTTTCAGATCGGCTTCATGATCTTCATTCCGTTTCTGATCATCGATCTGGTGGTGGCCAGTGTGCTGATGGCGATGGGTATGATGATGCTGTCGCCG CTGATCATTTCTCTGCCGTTCAAGATCATGCTGTTTGTGTTGGTGGACGGCTGGGCGCTGATTGTCGGCACCCTGGCTGGCAGTTTTGGTGGCGTATGAG CCGTTTTACTGAGGAGTCTGCCCGATGACGCCGGAAGTAGCCGTCGATCTGTTCCGCGAGGCGCTGTGGCTGACCACTGTGCTGGTCGCGATTCTTGTGG TGCCGAGCCTGTTGTGCGGTCTGCTGGTGGCCATGTTTCAGGCGGCCACGCAGATCAACGAACAGACCTTGAGCTTCCTGCCGCGTCTGCTGGTGATGCT CGTCACCCTTATCGTCATCGGCCCGTGGCTGTTGAAAATATTCATGGAATACATGCTGTCGTTGTACACCAGTATTCCGACCCTGATCGGCTAGCACCGC
DNA Sequence for Gene
>NG81_RS20975
ATGCAGCCGATGCTTGCGCTGACCGATACCCAGATCAGTACCTGGGTAGCCAGCTTCATGCTGCCGCTGTTTCGCATCATCGCGTTGCTGATGACCATGC CGATCATCGGCACCACGCTGGTCCCGCGTCGCGTGCGCATGTACCTCGCCGTGGCGATCACCGTAGTGGTCGCGCCTGCGCTCCCAGCCATGCCGCCCGT GCAGGCGCTCGACCTGAGCGCGCTGTTGCTGATCGGTGAACAGATCATCATCGGCGCCGGGATGGGCTTGTCGTTGCAGTTGTTCTTCCATATTTTTGTC ATCGCGGGACAGATCATCTCGACGCAGATGGGGATGGGCTTTGCGTCAATGGTCGACCCTACCAACGGTGTTTCCTCCGCCACCATTGGTCAGTTCTTCA CGATGCTGGTCACCCTGTTGTTCCTGGCCATGAACGGCCATCTGGTGGTGCTGGAGGTTCTCGTCGAGAGCTTTACCACGATGCCGGTCGGCAGTGGTTT GCTGGTCAATAACTTCTGGGAGCTGGCCAACGGGCTGGGCTGGGCACTGGCTTCGGGTCTGCGACTGGTATTGCCTGCGATCACCGCGCTGCTGATCATC AACATCGCCTTCGGGGTCATGACTCGCGCCGCGCCGCAACTCAACATCTTTTCCATCGGCTTCCCGCTTACGCTGGTGTTGGGCATGGTCATTCTGTGGA TGACGATGGGTGACATGCTCAATCAGTATCAACCGATCGCAACGCAGGCCTTGCAGGCGTTGCGCGATATGGTGAGGGCTCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGGCAGAAAACGAGAATGGCCAGGACAAGACAGAAGACCCCACGGAAAAAAAGGTCAAGGACTCACGGGCTGACGGCCAGATCGCGCGCTCCAAGGAGC TGACCACGCTGGTGGTGATGCTGATGGGGGCGGGCGGGTTACTGATGTTCGGCTCTGATATCGCCCTGATGATGTCCGAACTGATGCGTGACAATTTCAC GATATCCCGTGAAACCCTGATGGACCAGTCCTACATGGGCAAGGCGCTGCTCAGTTCCGGGATGCATGCGCTGGTCGTGGTCCTGCCGTTTCTGATCGCC ATGCTGGTTGCCGCACTGGTGGGGCCGATCATGCTCGGTGGCTGGTTGTTCGCAACCAAATCGTTGATGCCCAAGTTCAGCCGGATGAACCCGGCAGCAG GGCTCAAGCGCATGTTCTCGCCGCATGCGCTGGTCGAGTTGCTCAAGTCCTTCGGAAAATTCCTGATCACTCTGGCAGTGGCGCTGGTGGTCCTGAACAA
Amino Acid Sequence
>flagellar biosynthesis protein FliR
MQPMLALTDTQISTWVASFMLPLFRIIALLMTMPIIGTTLVPRRVRMYLAVAITVVVAPALPAMPPVQALDLSALLLIGEQIIIGAGMGLSLQLFFHIFV IAGQIISTQMGMGFASMVDPTNGVSSATIGQFFTMLVTLLFLAMNGHLVVLEVLVESFTTMPVGSGLLVNNFWELANGLGWALASGLRLVLPAITALLII NIAFGVMTRAAPQLNIFSIGFPLTLVLGMVILWMTMGDMLNQYQPIATQALQALRDMVRAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site