Strain | Pseudomonas syringae strain B576 contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATATGGGCGAGGGCGGCGCGCTGGTGGCGATTTCCTCGATTGCCGGCGGTGTGTATGGCTGGCAGGACCATTCCCATTACGCAGCGGCCAAGGCCGGCGT GCCAGGGCTGTGCCGGTCACTGGCGGTGGAACTCGCCCCGAAGGGCATCCGTTGCAACGCTGTGATTCCCGGCTTGATCGAAACACCGCAATCGCTGGAC AGCACGAACTCGCTGGGGCCGGAAGGTCTGGCGCAGGCGGCCAAAGCGATCCCCCTGGGCCGGGTCGGCCGAGCGGATGAAGTCGCTGCGCTGGTGCGTT TTCTGTGCAGCGATGATGCCAGTTACCTGACCGGGCAAAGCATCGTGATCGACGGCGGCCTGACCGTGCGCTGGCCCGAGTAGATCGATTCGGATCGGCA GCGAGCCTGCTCGCGAAGCGTTCAGTGCAGGCGCGTGCCAGTGCCTGAGTGTTCGCGAGCAATACGCCGTGATCCCCAAATCAACCAAGGAATCCGACCC
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DNA Sequence for Gene |
>NG81_RS01270
ATGCAGCAACTCAAACAAAAGCGGGCAGTGATCACCGGAGCAGGCAGTGGCATTGGCGCAGCCATCGCCCGTGCCTATGCGGCTGAAGGCGCGCGTCTGG TATTGGGCGACCGAGACGCCGACAGCCTGGCGAAGATCGCTGCAGAGTGCCGCCAGCTGGGCGCGCAGGTTCAGGAGTGCGTGGCCGATGTCGGCAGTGT CGACGGCGCGCAAGCCAGCGTCGATGCTTGTGTCGAGCAGTTCGGTGGCATCGACATTCTGGTCAACAACGCGGGCATGCTGACCCAGGCACGTTGCGTC GACCTGACCCTCGATATGTGGAACGACATGCTGCGCATTGACCTGACCAGCGTGTTCGTGGCCAGTCAGCGGGCATTGCCGCACATGATTGCCCAGCGCT GGGGGCGCATCATCAATGTCGCTTCGCAACTGGGCATCAAGGGCGGTGCCGAACTGACCCATTACGCCGCCGCCAAGGCCGGGGTGATCGGTTTCAGCAA ATCCCTGGCGCTGGAAGTCGCCAAGGACAACGTGCTGGTCAACGCCATCGCGCCCGGTCCTATTGAAACCCCATTGGTCGCCGGGATCAGCAGCGCCTGG AAAACCGCCAAGGCTGCCGAGTTGCCACTGGGCCGCTTCGGTCTGGCCGAGGAGGTTGCCCCGGTGGCGGTGCTACTGGCCAGCGAGCCGGGTGGCAACC TGTTCGTCGGTCAGACACTGGGCCCCAATTCCGGCGACGTCATGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAAACAGCTGGAGAACGCCTGATGTGTGGATTGTGCGGGCTGTTGGGTGAAGACGTGCACTGGAGCGATCCGCTGGCTGCAGAACTGCCCCGGCGGCGT GAGCGCTTGCGTCGTATTGCTGCAATCAACAAGGTGGTCGCGCCGTTTCGTCTGAAGGTCGAAGATTTTCAAGGCGTTTCCTATCTCCTGCTCGGGGCCA CCGGCAAGCAGGAGCTTGCGACCGGGCTGGAGCAGCTCTGGCAGAAAGCCGAGTTGCTGATCGGCCGGCCGCTGGACCCGCTTGATTCAGGTCTGCTCGA TCATCTGCAGAGGTCATCATGAGTATTGCCCTGAACGTAATTACCGGCTTCCTCGGCAGCGGCAAGACCACGCTGCTCAAACGCCTGCTGGCCGATGAAC ACATGGGCGACACCGCGCTGCTGATCAACGAATTCGGCGACGTGGGTATCGATCATCTGCTGGTTGAAGAGGTCGCACCGGATACCGTGCTGCTGCCCAG
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Amino Acid Sequence |
>3-oxoacyl-ACP reductase
MQQLKQKRAVITGAGSGIGAAIARAYAAEGARLVLGDRDADSLAKIAAECRQLGAQVQECVADVGSVDGAQASVDACVEQFGGIDILVNNAGMLTQARCV DLTLDMWNDMLRIDLTSVFVASQRALPHMIAQRWGRIINVASQLGIKGGAELTHYAAAKAGVIGFSKSLALEVAKDNVLVNAIAPGPIETPLVAGISSAW KTAKAAELPLGRFGLAEEVAPVAVLLASEPGGNLFVGQTLGPNSGDVMP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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