Pseudomonas syringae B576, NG81_RS15060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain B576 contig_16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCACGACGAGCTGACGGTGGCCGTGGTCGATATCGGCGCCACCATGACCACCCTGAGCGTGCTGCATCATGGACGGATCATCTATACCCGCGAGCAGC TGTTTGGTGGGCGCCAGTTGACTGACGAAATCCAGCGCCGCTACGGGCTCTCCATGGAGGAAGCCGGGCTTGCCAAGAAGCAGGGCGGCTTGCCCGACGA TTACGTCAGCGAGGTGCTCGAGCCCTTCAAGGAAGCGCTGGTGCAGCAGGTTTCCCGATCCCTGCAGTTCTTCTTCGCGGCCGGTCAATACAACTCAGTG GATTACATCATGCTGGCAGGCGGCACGGCTTCGATTTCAGGGCTTGAGCATCTGATCCAGCGGCGCATCGGCACGCCGACCATGGTCGCCAACCCGTTTG CCGACATGGCACTGAGCTCCAAGGTCAATGCCGGCGCCCTGGCCAGTGATGCGCCGGCGCTGATGATCGCGTGCGGCCTGGCGTTGAGGAGCTTCGACTG
DNA Sequence for Gene
>NG81_RS15060
ATGGCGCGGATCAACTTATTACCGTGGCGCGAAGAGCTTCGCGAAGAACGAAAGAAACGCTTCCTGACCGCACTGGTCGGCGTGCTGGTGGTGTCAGTCG GCATTCTGTTTCTGATCGATCGTTACGTCAGCAATGGCATCGAGCATCAGATGGCGCGCAATGCCTTTCTGCAGACGCAGATTGCTCAGCTCGATATCCG TATCAAGGAGATCAGTGATCTCAAGGCCCGTCGCAAACAGTTGCTCGAGCGCATGAAGATCATTCAGGACCTGCAAGGCAACCGCCCGATCACCGGACGC GTCTTCGATCAACTGGCGCGGACCCTGCCGGACGGCGTTTATTACTCGCAGGTCAAAATGACCGACAAGCTGATTGCCATCAGTGGCGCTGCCGAGTCGA ACAACCGGGTTTCCGACCTGATGCGTAACCTTGAAGCCTCTGACTGGCTGGAAGCGCCGAGCCTCACCGAGGTCAAGGCCACTACGGCCGGTGCCGTGGA TCAAGCCAACGTCTTTCAGCTGACTGTACGTCAGACTCAGCCCCCGGTTGCCGCTGTCCCTGCCGCAGGAGCCAAGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATATGTCCGAATGGCTGGAAGGGCTGCGCAAGGTCGATCTGAGCGAACTGGACCTGAACAACCTGGGCTCATGGCCCGCAGCGGTCAAGGCCATTGCCGG GCTGCTGGTTGCGGTCATGATTTTCGCACTGGGCTATTTCTTCTTTATCCAGGACCTGGAAACCCAGCTGGAAAGTGCCCAGAGCAGCGAGGTGACGCTC AAGGAGCAGTTCTCCAACAAGGCCTTCCAGGCGGCCAACCTCGAGCCGTACAAGAAGCAGATGGAAGAAATGGAAAACACCTTCGGCGCGCTGCTGCGGC AATTGCCCAGCGACACCGAAGTGCCCGGCCTGCTTGAGGACATCACGCGCACCGGGTTGGGAAGCGGACTCGAGTTCGAGGAAATCAAGCTGCTGCCCGA GGCGGTCCAGCAGTTCTACATCGAGCTGCCGATACAGATCACCGTGGTCGGGGGTTATCACGACCTGGCGACCTTCGTCAGCGGCGTAGCCAGCCTGCCG
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREELREERKKRFLTALVGVLVVSVGILFLIDRYVSNGIEHQMARNAFLQTQIAQLDIRIKEISDLKARRKQLLERMKIIQDLQGNRPITGR VFDQLARTLPDGVYYSQVKMTDKLIAISGAAESNNRVSDLMRNLEASDWLEAPSLTEVKATTAGAVDQANVFQLTVRQTQPPVAAVPAAGAKP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site