Pseudomonas syringae B576, NG81_RS14610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae strain B576 contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGCGATGCCGGACGAGGGTTTGCCGTGGTGGCTGACGAAGTGCAGCGGCTGGCCGAGCGTTCGTCGTCTGCGACCAAGCAGATCGAAACGCTGGTCC GGGCCATCCAGAACGACACCAACGAGGCGGTTATCTCCATGGAGCAGACCACCAGCGAAGTGGTGCGTGGCGCACGCCTGGCGCAGGACGCCGGAGTGGC GCTGGGGGAAATCGAAGGGGTGTCCAGGGTGCTGGCCGAACTGATCGAAAGTATCACCGATGCCGCCCACCAACAGGCTGAGTCTGCCGGGCAGATTTCG CAGATCATGACCGTCATTCAACAGACCACTTCGCAGACCACCTCGGGCACCTCGGCCACTGCTGAAAGCATTGGCAACCTGGCGAAAATGGCCAGCGAAA TGCGGCGTTCGGTATCGGGCTTTGCCCTGCCGTCATCGAAGAAAGCCGGATGATGTACCGCACATGAACAACCTTGATTGGGTAACGGACGGTACTCGTC
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| DNA Sequence for Gene |
>NG81_RS14610
ATGGCTGATCGTCACGATTACGTTGCTCTTGAGTGGCTGAAGGGCGAGATCGCCGAAACGCTGCGCCAGGCCCGTCAGGCGCTGGACCTGTTCATCGAAG ACCCGGCCAATGCTGCTGCGATGGCCGAGTGCCTGAACCTGGTGCATCAGGTTCACGGCAGTCTGCAGATGATCGAGTTCTACGGCGCCGCGTTGCTGGC CGAGGAAATCGAGCAACTGGCGCTGGCGGTCCAGCAGAACCGTGTCAGCCATCCGGTCGAGTCCGAGCAGCTGTTGATCCAGGCCATGAGTCAGTTGCCG GTTTACCTGGAGCGCATTCATTCCGCGCGCCGCGATCTGCCGCTGGTGGTCTTGCCACTGCTCAATGACCTGCGCAGCGCGCGGGGCGAAAGTCTGCTCT CGGAAACCAGCCTGTTCGCCCCGCAGCTGGTCGTCGTGCCGCCGCTTGATGAGCAGGAGCTGGCGCGGCGCAATACCCCGGAATTGCCCAACCTGCTGCG CAAGCTGCGCCAGACCCTGCAGGCGGCGCTGGCCGGCCTGATGCGCGAGCAGGGCGTGCAGACCCAGCTCGGTTACATGGCCAAGGTGTTTGCCCGGCTT GAGCAGTTGTGCGAAGACGCGCCGCTCGGTGCGCTCTGGCGGATCGCCTCGGCACTGGTCGAAACCATGCTCAACGGCAACTTCACCAACAGTCCGGCGC TGCGCAGTCTGTTGAAGGACGCCGACAAGGAACTCAAGCGTCTGGCCGAGCAGGGCGTCATCGGCATCAATCAGCCCGCCCCCGAAGAGCTGTTGAAAAG CCTGCTGTTCTACATCGCCAAGTCCGACAGCCTGGCGCCGAAGATGCTCGACCTAAAGGACCAGTACGCGCTGGCCGATGCCTTGCCCGGCAACGACGTG GTCAACGAAGAGCGCGCCCGCATGGCCGGTCCGGACCGAGACGCCATGCGTTCGGTGATCGTGGCCTTGTGCGAAGGGCTGGTCAGGGTCAAGGAACGGC TCGACGTGTTCGTGCGCGGCGACCGTCAGCATGTCAGCGAACTCAATGCGTTGCTGCCGCCTTTGCGGCAGATTGCCGACACCCTGGCGGTGCTGGGTTT CGGCCAGCCGCGCAAGGTGATCATCGATCAGTTGTCTGTGGTCCTTGGTCTGGCGCAGGGGCAGCGCGAACCCAGCGACGCGGCGCTGATGGATGTCGCG GGTGCCTTGCTCTACGTCGAATCGACCCTTGCCGGCATGGCCGGGAGTCACGAGCAGGTCAGCCGCGAAGAAAGCCGCCTGCCGACCACCGACCTGACGC AGATTCATCAACTGGTGATTCGCGAAGCCCGCACCGTGTTGCAGCAGGCCAAGGACGTAATCCTCGATTACATCGATGGCGAGTGGGACCGACAGCGGCT CGATCCGCTGTGCGCGCTGATCGTGCAGGTTCGTGGTGCGCTGGCCATGATCCCGCTGGCCCGTGCGGCCAGCCTACTGGCCGCCTGCAACGAATACATT CAGGAACACCTGCTGGTGGACGAAACCCGTCCCACCTGGGTTCAGCTCGATTGCCTGGCCGACACCATCACCGGCATCGAGTATTACCTGGAGCGCATGC TCGAAGATCATCAGGCGCCGGGCGACCAGGTGCTCGACATGGCCCAGCAAAGCCTGGCACGGCTGGGCTATACGCCCGCTGCGGACACCCTTGAAGTGCC GTTGCTCGAAGAAATCATCACTCAGGACGAGTTGCTGGAACTGGATGACCGCAAGGCGCTGGTCAGCCCCACGCAAACCATTGCCCAGGTCCTCGCCAGT CCGGTCTCGGCCGTCAACCCGCCCGCCCGTAACGTCCCCACCAGCCTGTTGCCGCCCTCCGCCGGGGAAGAGGCGGTGGACGACGAGTTGCGCGATGTGT TTCTCGAAGAGGCCGACGAGGTGCTCGACGCGCTGCGCGAGTACCTGCCGCGCTGGTTCGCCTCGCTCGGCCGCGACGGCCATTGGGACAGCACGGCGCT GACCGAAGTGCGTCGTGCGTTTCATACCCTCAAGGGCAGCGGCCGGATGGTGCGTGCGCTGATCCTCAGCGAACTGGCCTGGTCGGTGGAAAACCTGCTC AACCGGGTGCTGGAAGGCGATGTGCTGCCGGGCCTGGAAGTGCAGCAACTGATGAGTGAAGTGCAGGCGCTGCTGCCGTCGGTTATCCGCGATTTTGCCG AAGATGCGCAGTGCCAGCGCGACGATGTCGACCTGTTGGCGGCTCGCGCCCATGCGTTGGCCAATGGGCTGGAGCCACCGACGCTGCCGGCCGTGGATGA TCCTGCGCCAGGCAAACCTGTTGCCGACGAACCGCTCGATCCACAGTTGCTGGAGATTTTCCGTCAGGAAGCGCTCGGCCATCTGAATACCCTCGGCCGC TTCCTCGACAATGCCGAACAATCAGCGTCGCCGGCGATCAGCGACGCGGTGCTGCGTGCGTTGCATACGCTCAAGGGCAGCGCGCACATGGCAGGGGTGC TGCCGATTGCCGAACTGGCCAGCCCGCTCGACCAGTTAGTGCGTGAATACAAGGCCAACCTGATCGATATCGGTTCACCGGAGCTCGTCCTGCTGCGAAG CGCCGAACCGTTGCTGCACAAGGGCCTCGAACAACTGGACAGCACGCCGCTGGCCGATATTCCGGGCGCCGCGCCGCTGATCGAGGCTGCCCTGGCGATG CTCAACGACCGCCTCACCGTGGTGCTGCGTGAGTCGGACAGCGGCCTGCGTATCAAGCGCAACCCCACGCTGCTCGCCGGTTTTCTGGCCGAAGGCATGG ACATCGTGCTGGATGCGGAAAACCTGCTGCGGGGCTGGCGGCAGCACCCCGGCGAACGCCAGGAACTGAGCGCGCTGCTCGACGAGCTGACCACCCTCGG TCATGGCGCGCATCTGGCCGACCTGCCGCAGGTCGATGAGCTGTGCGAAGCCTTGCTCGACCTCTACGGCGCGGTCGAGGAAAGCAGTCTGGCAGTCAGC GAGCGCTTTTTCGATGTGGCAGAAAATGCTCACGAAGCGCTGATCAACATGCTTGATCAGGTGGCCGCTGGTCAGGATGTCGAGCCACGTCCCGAATGCG TGCGTGCCTTGAACCAGTTGCTGGATCAGGCGCTTGACCCTTCGGCGACCGGGCTGGTCAAGAGCGACGGCCACCGCACCTTGAGCGTTACCGAGCTCAA CGCCGCCACCGCGCAGCTGGCCAGCGAGGCCGGGCACACTGAGACTGAAGTTGCCGGGCCGGACGACGAAATCGTCGAGATATTTCTGGAAGAGGCCGTC GATATCCTCGACAGCGCCGGTCAAGCCTTGCAGCGTTGGCTGGCCGATCCGGAAAACCCTGCGCCGCTGGCCTCCTTGCAGCGCGACCTGCACACCCTCA AGGGCGGTGCGCGGATGGCTGAGGTGGCCGAGGTGGGCGACCTGGCCCACGAACTGGAAAACCTCTACGAAGGCTTGATCGACCGGCGCTTCAACCATTC GCCGACGCTGGCCGAGCTGCTGCACGAGAGCCACGACCATCTGGCCATTCTGCTTGAGCAGCTGTATCGGCAGGAAGCGCTCAGCGACCCTTCGGCTTTG ATCGAGGCGCTGCGCAGCTGCCGCACGCTCGAGAGCGCCGGGCCTGAGGCGCAGGCCTCGCCTGCCGCCAGTGAAGATCCTCCAGAGCATGACACCGAGC TGCGTGAAGTCTTCCTCGAGGAAGGTTTCGACATCATGGAAAGCTCGGGCGCGGCATTGGCGCGCTGGCAGGCCGATCCGCAGAACATGCTGGAAGTCGA AAACCTGCTGCGCGACCTGCACACCCTCAAGGGCGGCGCGCGGATGGTGGAAATTGCTCCGATAGGCGACCTCGCCCACGAGCTGGAGACGCTTTACGAG GGGCTTTCCGCCGGCAGCCTGCAGCCTGCGCCGTTGATGATGGGGCTGTTGCAGAGCGGCCAGGATGTGCTGGCCGACATGCTCGATGCCGTGCGCAGTG ACAAGCCGCTGCCTGACGCGACCTTGCTGATTGAGAGCATTCGCAGACTGGCCACCGACGAGCCGTCGGGCGCAGTGCTGGCTGCGCAGGGCCTGGAGGT CCATCCGGAGTCGGTGGTCGCCGTGGCCCCGGTCGCCGAGGGCGAGGTCGAGCGCAGTGGTCCGGAAATGGTCAAGGTGCCTGCCGAGCAACTGGAAGAC CTGGTCAACCTGGCCGGCGAAACCTCCATTTTCCGTGGACGTATCGAACAGCAGATTATTGATTCACAGATCGCCCTGGTAGAGATGGAAACCACCATCG AGCGGATGCGCGATCAGTTGCGTCGTCTTGATATGGAAACCCAGGGGCGCATTCTCAGCCGTGAGCAGGTTCAGGCCGAGCGGCTGGGCTATGAAGAGTT CGACCCGCTGGAAATGGACCGCCATTCCCAGTTGCAGCAGTTGTCGCGCGCTTTGTTCGAATCGGCGTCCGACCTGATGGACCTCAAGGAAACCCTCGGC GCGCGTGCACGCGACGCGGAAACGCTGCTGTCGCAACAGGCCAGGGTCAACACCCAGCTTCAGGAAGGCCTGATGCGTACGCGCATGGTGCCGTTCGAAC GATTGGTGCCGCGCCTGCGTCGCGTGGTGCGCCAGGTGGCCTCGGAACTGCACAAGAAAGTCCATTTCGAAGTGGGCAACGCCGACGGTGAAATGGACCG CAACGTGCTGGAACGAATGGTCGCGCCACTGGAGCACATGCTGCGCAATGCCGTCGATCACGGGCTTGAAAGCACCGAAAAACGCATCGCTGCCGGCAAG CCGGAACAGGGCCATATCAGTCTGGAATTGATGTACGAAGGCGGCGATATGGTCATCGAACTGAGCGATGACGGCTCGGGCGTTGACCTCGCAGCGGTAC GCCGCAAGGCCATCAAGCGTGGCATGATCCATCCGGATGCCGATCTGTCCGACCATGAAGTGCTGCCGTTCATCCTGCAGGCGGGTTTTTCCACCAGCGA GATCATCACCCAGATTTCCGGCCGTGGCGTGGGCATGGATGTGGTGCACGCCGAGGTCAAGCAACTGGGCGGTTCGATGGTCATCGACTCGGTACCGGGC CAGGGCACGCGCTTCCGTATTCGACTGCCGATTTCGGTGTCGGTCAACCGGGCGTTGATGGTGACGTGCGGCGAAGAACAGTATGCGGTGCCGCTCAATA CCGTCGATGGCATCGTGCGCGTCATGGCCAATGAACTGGACGGCTATTACCAGACCACCCCGCCGCGCTATCAATATGGTGGGCGCAGTTACGAGTTGCG CTATCTGGGCGAGTTGCTGGGCAGCAGTCCGCCCCGGCTGGCCGGGCAATTGCAGCCGCTGCCGGTGCTGCTGGTGCATCTGCAGGATCAGTGGGTGGCG GTGCAGGTCGATGCGCTGGCAGGCTCGCGCGAGATCGTGGTCAAGAGCCTCGGCCCGCAGTTCTCCAGGGTGCAGGGCATTTCCGGTGCGACCATCCTGG GTGACGGGCAAGTGGTGCTGATTCTTGATCTGATGGCGAAGATTCGTACCTTGCAGGGCTTGCCTTTCAGAGGAGGCATGGCGCCTGCCTACCACGAAGC CGAGCACGCCAGACCGCTGTTGGTGATGGTAGTGGACGATTCGGTGACGGTGCGCAAAGTTACCAGCCGCTTGCTGGAACGCCACGGCATGCACGTGCTG ACCGCCAAGGACGGTGTCGATGCCATGACCCTGTTGCGGGAGCACACGCCTGACATCATGCTGCTCGATATCGAAATGCCGCGCATGGACGGCTTTGAAG TCGCCAGCCAGATCCGCCAGGACGAACAGCTCAAGGAATTGCCAATCATCATGATCACCTCCCGCTCGGGCCAGAAGCATCGCGATCGGGCGATGGCGGT GGGCGTCAACGAGTACCTGAGCAAGCCGTATCAGGAAACCGTATTGCTGGAGAGCATCGCTTACTGGAGCCAGGCACATGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCACGTTTCAGACAAGCCGTCTGACCAGCCTGACCGGCTTGCTGGTGCCGTTGAGTGACCGGCATCTGCTGCTGCCCAATGTCGCGGTCGCCGAGTTG ATCGATTATCAGGATTGCAGCGCAGAGCCGGACGCCCCTGAGTGGTACCTCGGGCCGATCAGCTGGCGCGAACTGACCTTGCCACTGCTCAGCTTCGAAG CTGCCTGCGGAGGCCGCACCCGCGTTGGCGGTCGAGCCCGGATCGTGGTGCTCAACGCGCTGGGCGGACGCAACGACGTCAGATTCATCGCCCTGCTGAC CCAGGGCATCCCGCGCTCGTGCAAGGTCGACAGCCAGTTGAGCTACGTCGACGTCCCGCTGGCCGAATTGGAACTGGCCGCCGTACAGATCGGCGAAACC GTAGCCCGCATTCCCGACCTCGAAGGGCTGGAGCAATGGCTGGTGGATGCAGGGCTGTCGTAGTTAAAGAGGACGCGGAGCGTCCAGAACGGCATGCGAC
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| Amino Acid Sequence |
>histidine kinase
MADRHDYVALEWLKGEIAETLRQARQALDLFIEDPANAAAMAECLNLVHQVHGSLQMIEFYGAALLAEEIEQLALAVQQNRVSHPVESEQLLIQAMSQLP VYLERIHSARRDLPLVVLPLLNDLRSARGESLLSETSLFAPQLVVVPPLDEQELARRNTPELPNLLRKLRQTLQAALAGLMREQGVQTQLGYMAKVFARL EQLCEDAPLGALWRIASALVETMLNGNFTNSPALRSLLKDADKELKRLAEQGVIGINQPAPEELLKSLLFYIAKSDSLAPKMLDLKDQYALADALPGNDV VNEERARMAGPDRDAMRSVIVALCEGLVRVKERLDVFVRGDRQHVSELNALLPPLRQIADTLAVLGFGQPRKVIIDQLSVVLGLAQGQREPSDAALMDVA GALLYVESTLAGMAGSHEQVSREESRLPTTDLTQIHQLVIREARTVLQQAKDVILDYIDGEWDRQRLDPLCALIVQVRGALAMIPLARAASLLAACNEYI QEHLLVDETRPTWVQLDCLADTITGIEYYLERMLEDHQAPGDQVLDMAQQSLARLGYTPAADTLEVPLLEEIITQDELLELDDRKALVSPTQTIAQVLAS PVSAVNPPARNVPTSLLPPSAGEEAVDDELRDVFLEEADEVLDALREYLPRWFASLGRDGHWDSTALTEVRRAFHTLKGSGRMVRALILSELAWSVENLL NRVLEGDVLPGLEVQQLMSEVQALLPSVIRDFAEDAQCQRDDVDLLAARAHALANGLEPPTLPAVDDPAPGKPVADEPLDPQLLEIFRQEALGHLNTLGR FLDNAEQSASPAISDAVLRALHTLKGSAHMAGVLPIAELASPLDQLVREYKANLIDIGSPELVLLRSAEPLLHKGLEQLDSTPLADIPGAAPLIEAALAM LNDRLTVVLRESDSGLRIKRNPTLLAGFLAEGMDIVLDAENLLRGWRQHPGERQELSALLDELTTLGHGAHLADLPQVDELCEALLDLYGAVEESSLAVS ERFFDVAENAHEALINMLDQVAAGQDVEPRPECVRALNQLLDQALDPSATGLVKSDGHRTLSVTELNAATAQLASEAGHTETEVAGPDDEIVEIFLEEAV DILDSAGQALQRWLADPENPAPLASLQRDLHTLKGGARMAEVAEVGDLAHELENLYEGLIDRRFNHSPTLAELLHESHDHLAILLEQLYRQEALSDPSAL IEALRSCRTLESAGPEAQASPAASEDPPEHDTELREVFLEEGFDIMESSGAALARWQADPQNMLEVENLLRDLHTLKGGARMVEIAPIGDLAHELETLYE GLSAGSLQPAPLMMGLLQSGQDVLADMLDAVRSDKPLPDATLLIESIRRLATDEPSGAVLAAQGLEVHPESVVAVAPVAEGEVERSGPEMVKVPAEQLED LVNLAGETSIFRGRIEQQIIDSQIALVEMETTIERMRDQLRRLDMETQGRILSREQVQAERLGYEEFDPLEMDRHSQLQQLSRALFESASDLMDLKETLG ARARDAETLLSQQARVNTQLQEGLMRTRMVPFERLVPRLRRVVRQVASELHKKVHFEVGNADGEMDRNVLERMVAPLEHMLRNAVDHGLESTEKRIAAGK PEQGHISLELMYEGGDMVIELSDDGSGVDLAAVRRKAIKRGMIHPDADLSDHEVLPFILQAGFSTSEIITQISGRGVGMDVVHAEVKQLGGSMVIDSVPG QGTRFRIRLPISVSVNRALMVTCGEEQYAVPLNTVDGIVRVMANELDGYYQTTPPRYQYGGRSYELRYLGELLGSSPPRLAGQLQPLPVLLVHLQDQWVA VQVDALAGSREIVVKSLGPQFSRVQGISGATILGDGQVVLILDLMAKIRTLQGLPFRGGMAPAYHEAEHARPLLVMVVDDSVTVRKVTSRLLERHGMHVL TAKDGVDAMTLLREHTPDIMLLDIEMPRMDGFEVASQIRQDEQLKELPIIMITSRSGQKHRDRAMAVGVNEYLSKPYQETVLLESIAYWSQAHV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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