Pseudomonas syringae B576, NG81_RS14410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae strain B576 contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGCGATGGCGCGTACGCCTGAAGAGCTGTCCAAGAAATTTCGTTACAACCAGCGTCGTGAGCTTCGCTTGCTGGAGGAGGCCGGCGGGACGGTAAGGC CTGTCAGCGAGTTCAGTAGCGCGGAGCTGGCAAGTATGTACTGCGATCTGTTTCAGCGGCGCTGGGGCTTCGAGGCGACCGGTGCCCGGCACAAGGCCGA GGTCATTGAGCTGTTGCGCGAGCTGCTGATCGGTTCGGTGGTGTTTCTCAACGATGCGCCGATTGCCATTCAACTGGTGTATCGCGTCGAAGCGCCGCAG TGGGTCAGCATCGAGTACGTCAACGGCGGTGTCGATCCCCAAACCCGTGATTTCAGTCCGGGCAGCGTGCTCAGCTTTGTCAATACCCAGTCCGCCTGGG AGAACGCCCGTGCGCAGGGCAAATCACTGCGTTTTTCCTTCGGTCGTGCCGACCGCGAGTACAAGGACCGATGGTGCAACCCCGTTCCGGTGTTCCAGAT
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| DNA Sequence for Gene |
>NG81_RS14410
TTGAGTCGCAAGCAGCAATTGCTCAAACGCCATCGCCGTAACAAGCGGCTGGCGTTGCTGGGTGGGCTGCTCCTGTTGATCGCGGTGGGCGTGCTGGTGG CTTGGTGGCTGGCCCCGCTGCTGGCCGTGTGTGCCTGGGTCGCTCATGAGGCCTGGTTCGCTGATCATCTGTTCTACTCGCCGTCTGACGACTATCAGTA CACCTTTGCTGCCGAAAGCGAAGTGCCGGGTGTACGCCTGGACGGCGGCACGTTGCTGATCGACCCCGCTGTGCAACTGAACGGCGACGAGACGCTGATA CTGGCGCTGACGGTCAAAAGTACCTGGCTCGGGCGTTTTCTCGACCCTGTGGTCGAGCTGCAAGGCCAGGGCCTGAACGACCAGCAGGCATTCGAGCGTG GCGTCTGCGGCGTGCGCTATCTGAACCTCACCGGGCTGGGCGAGCCGCTGGCCGCAGGTGTGCTGAAACTGCGTGGGCGTTGCTGCCGTCTGGCCGGCAC GCCGCGGCTCTGGCTGTTTCGTCAGCCGGATGCGCGAAAACAGCGTGTCATGGTCATCGCACCGCACGCCGACGATGCCGAGCTGGCCGCTTTCGGGCTT TACAGCCAGGCCGAGGAAGCGTGGATCATCACACTGACCGCCGGTGAGATCGAGGCCGAGCATTATCAGCAGATGGGCATGGAGCGCGCCGAAGCTGCGC GCATGAAAGGCCGCTTGCGGGCCTGGGACAGTATCGCCGTGGCGCGCTGGGGCGGGGTGCCCGAGTCGCAGTGTGTTCAATTGGGCTATTTCTGCCTGCA ACTGCCTGCCATGCAGGCCGCGCCGGATACGCCGATTGGTTCGCGTGAGGCGGATCTGACCGATACCCGCCTGTTCCGTCAGTTCAATACCCTGCCATTG CCCGGCGACAACGGCCAGCCGACCTGGAATAACCTGCTCGCCGACCTGCGCGCGCTGATTCTCAAGGCCCGGCCGCAGGTTGTGGTGATGCCGCACCCTG CCATCGACCCCCATCCCGATCACATCTGCGCCCAGGCTGCGGTGCGTGAAGCCCTGCTCGGGCTCGAATGGCAGCCGGACGTGGTGCTCGGTTATGCCAA TCACCTGCACGACAACGACCGCTGGCCGATGGGCGATGCCTACAGCGGCATCAGCCTGCCGCCGGTATTCGATGCCGCGCTGGCGCTGGTGCCGTACAGC CTTCAATTGTCGGTCGCCGCGCAACGCGATAAGGCGATGGCGCTGGGGATGATGCATGACCTGCTGCCGCCGATGCCGTTCAAGCGCCGTGTGCGCCGTG CGCTGCAGCGGGTTCTGGCCGGTCGCCACTGGCCGGCCGAGGGCGAAAACGAATTCTTCCGCAAGGCGGTGCGACGACACGAGTTGTTCTGGTGCAGCCG TGATCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCAGCAGGCGCAGTACTGCAAGGAAAACCATGAAAGTTCTACTGCTGGTCCAGAAAGAGCAGCGTGCGATTCTGGACCGTCTCTATGACGGCATCGCCG CACATTGTGAATGCGAAGTGCGCTGGCTGAGCTCTGCGGAGCAACGCAACCTGCGTGGTTATTTCCGCCGTGAGGTGGACGTCAGCCGCTATGACCGGAT CGTGTTTTTCCTGCGTTTCAAGCAGGAAGTGCGTCAGGTCGGCTTCATCCGCACGATTCCCAATCTGGTCATCCTCGAACACGATGCCTACCAGAACTAC ATTCCGTGCAAATACACCGGCAAGTTCAGCGCGCACTATCGCAAGCTGCCTTGGGCGCGAGTGATCTGCTCGGGGTTCATGGTCAGCGAACGGCTGCGCC AGGAAGGCTTCGATGCGGTGTTCGTGCCTAAGGGCTATGACCAGAGCCTGCTGCAGTTGCAGGCACGCGAGCGTGACATCGAACTGGCTTTCGTGGGCAG
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| Amino Acid Sequence |
>GlcNAc-PI de-N-acetylase
MSRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPLLAVCAWVAHEAWFADHLFYSPSDDYQYTFAAESEVPGVRLDGGTLLIDPAVQLNGDETLI LALTVKSTWLGRFLDPVVELQGQGLNDQQAFERGVCGVRYLNLTGLGEPLAAGVLKLRGRCCRLAGTPRLWLFRQPDARKQRVMVIAPHADDAELAAFGL YSQAEEAWIITLTAGEIEAEHYQQMGMERAEAARMKGRLRAWDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPIGSREADLTDTRLFRQFNTLPL PGDNGQPTWNNLLADLRALILKARPQVVVMPHPAIDPHPDHICAQAAVREALLGLEWQPDVVLGYANHLHDNDRWPMGDAYSGISLPPVFDAALALVPYS LQLSVAAQRDKAMALGMMHDLLPPMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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