Pseudomonas syringae B576, NG81_RS13575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain B576 contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCACTCATAGCGAGATCGTTGGTGCGCTGTATCGCGATCATCGCGGCTGGCTGCTGGCCTGGCTCAGACGTAATGTCGCCTGCCCGCAACGTGCTCAGG ATTTGAGTCAGGACACCTTCGTGCGTTTGCTGGGGCGCCATGAATTGCTTGCGCCCAGAGAACCGCGTGCTTTCCTGGCAACCGTCGCCAAAGGGTTGAT GTTCGATCACTTCAGGCGCGCTGCGCTGGAGCAGGCCTATCTCGGGGAATTGATGCTGGTGCCTGAGGCCGAGCAGCCCTCTCCGGAAAAGCAGATGCTT ATTCTGGAAGACCTCAAGGCCATCGACCGCATGCTCGGCACGCTGTCCAGCAAGGCGCGGGCGGCCTTTCTGTACAGTCGCCTCGACGGCATGAGTCACG CCGAGATTGCCGAGAAGCTGGGCGTTTCGGTCTCGCGCGTCAGGCAGTACCTGGCTCAGGCCATGCGGCAGTGCTACGTGGCGCTTTACGGTGAGCCAAC
DNA Sequence for Gene
>NG81_RS13575
GTGAACACCAGACCGGTCTCTGCCCGTGTGCTCGATGCGGCCATCGAGTGGCAACTGAACATGGACAGCAACGGCGGCAATGACGCCGAGCTGGCGCGCT GGCTGGCCGCCGACGAAGAGCATGCCCGGGCCTGGAGCCAGTTGGGCATGGTCAATCAGCGCTTTGCTTTGCCCGCAGGTCCGGCACGCAAGGCGTTGCA ACAGTCACCGGGTGCCCTGCGACACAGTTTGCGCAAGCTCGGTGGCGGTCTGGCCGGAGTGTTCATGGCCTTGGGCCTGGCATTGTTCGTCGGCGACCGC TATCTACCGATAGATTACTGGCTTGCCGACCAGCGCACGGCCACCGGTGAACAGCGCGACGTGCGTCTGGCGGACAACACCCTGATTCGTCTGAACACCC ACAGCGCAATCGATGTGCGCTTCGATGCGCAGCAACGTCGGGTCATTCTGCAGGACGGTGAAATACTGGTGCAGACCGGCGATCATGACGACCCGCGGCC CTTCATCGTCGAGACGGCGGATGGAAAGATGCGCGCCCTGGGAACGCGTTTTCTGGTCCGGCGCGAGTCCGATGGAACCCTGCTCAGCGTTTTGCAATCG GCGGTTGTCGCCCACCCGCGCAATGCTCCCGGTGAACAGGTTCTGCGCGAAGGCCAACAGGTGCTTCTGAGCCGCAACGGCCTTGGCCCGTTGCTTGGCA TGCCTTCCGGCGCCGATGCCTGGACGCGCGGCATGCTGGTAGTGGACAACGCGCGGCTGGCGGACATGCTCGCTGAACTGGGGCGCTACCGGACAGGACA TCTGGGCGTCGATCCGAAGGTGGCTGATATGCGGGTGACCGGCACCTTCCCGTTGAATGACACAGACCTGGCGCTCAAGGCGCTGCTGCCGACCTTGCCT GTGCAGATAGAACAACACACAGCGTGGTGGGTGTCCGTGCTGCCCAGGGATCAACAGCCCGGTAATCCTCCGGCAAAACTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACATACCTGTTCATGCAGACAGCGTATCGCCCTGACACTTTTTCGGTTTCGAGCGGCTTAGTCTTACAAGTCATTTCGGGGACGCGCTCAGCGCTGCGT CCCTTCGTCTGTGGATAAACCATGAAAAGCCAAACCGTGCGCCGCTGGTCCATCGTGCATACCTGGAGCAGCCTGATTTGCACCCTGTTCCTGTTGATGC TGGCTGTCACCGGCCTGCCGCTGATCTTTCATCATGAAATCGATCATCTGCTCGGCGACGCTCCGCATTACAAAGAGATGCCTGCCGATACGCCACGCCT GGACCTGGAGCAACTGGCCAGGGCTGCCGAAGCGCATCGCCCCGGCGAGGTGATGCAGTATTTTGGCTGGGACGACGAAGACCCCAATGGCGTAATGGCA ATCACCGCTGCAACCGCCGGCACCGAGCCCAACTCGTCGCACACCTTCGCCCTCGATGCGCGCACCGGTGAGGCACTGGAGATGCCTTCTGCCAACGGCG
Amino Acid Sequence
>amino acid ABC transporter substrate-binding protein
MNTRPVSARVLDAAIEWQLNMDSNGGNDAELARWLAADEEHARAWSQLGMVNQRFALPAGPARKALQQSPGALRHSLRKLGGGLAGVFMALGLALFVGDR YLPIDYWLADQRTATGEQRDVRLADNTLIRLNTHSAIDVRFDAQQRRVILQDGEILVQTGDHDDPRPFIVETADGKMRALGTRFLVRRESDGTLLSVLQS AVVAHPRNAPGEQVLREGQQVLLSRNGLGPLLGMPSGADAWTRGMLVVDNARLADMLAELGRYRTGHLGVDPKVADMRVTGTFPLNDTDLALKALLPTLP VQIEQHTAWWVSVLPRDQQPGNPPAKL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site