Pseudomonas syringae B576, NG81_RS11150

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain B576 contig_11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGAGGTGATGCTTAAAGTGTTGTATGGGTTGAAAAATTTTGAAGGTAAATCTAAATTTAAAACCTGGCTGTACAGCATCACCTACAATGAATGCATCAC GCAGTACAGGAAGGAACGGCGTAAGCGTCGCTTGATGGACGCGCTGAGTCTGGATCCACTTGAGGAAGCGTCGGAAGAAAAGGCGCCCAAACCTGAAGAA CGGGGCGGACTTGATCGCTGGCTTGTGTATGTGAACCCGATCGATCGGGAGATTCTGGTCCTGCGTTTTGTTGCAGAACTTGAATTCCAGGAGATCGCTG ACATCATGCACATGGGCTTGAGCGCAACGAAAATGCGTTACAAGCGGGCTTTAGATAAATTACGAGAGAAATTTGCGGGAATCGCCGAAACTTAATACGG TGCAAATATCTCTAACAAACTGGCAAGGTCTGGTAGACTTGCCGCTGAGTTGTCCCCATGTGTGGGACTGCTTAATAATCATCAGATGGGGATTTAACGG
DNA Sequence for Gene
>NG81_RS11150
ATGAAACTGAAAAACACCTTGGGCTTGGCCATTGGTACTATTGTTGCCGCAACTTCGTTCGGCGCGCTGGCTCAAGGCCAAGGCGCGGTCGAAATCGAAG GCTTCGCCAAGAAAGAGTACTACGACAGCGATCGTAACTTCAAAAACGACGGCAACCTGTTCGGCGGCTCCGTTGGCTACTTCCTGACTGACGATGTTGA GCTGCGTCTGGGCTACGACGAAGTCCACAACGTCCGTAGCGACAGCGGCAAGAACATCAAGGGCGCAGACACTGCTCTGGACGCTCTGTACCACTTCAAC AACCCAGGCGACATGCTGCGTCCATACGTATCTGCCGGTTTCTCTGACCAGAGCATCGGTCAAGACGCTCGCCGTGGCCGTGACGGTTCCACCTTCGCCA ACATCGGCGGCGGCGCCAAGCTGTACTTCACTGACAACTTCTATGCCCGTGCAGGCGTTGAAGCTCAGTACAACATCGACCAAGGCAACACCGAGTGGGC GCCTAGCGTCGGTATCGGTGTAAACTTCGGCGGCGGCAGCAAGAAAGTTGAAGCAGCACCAGCTCCAGTAGCTGAAGTGTGCTCCGACAGCGACAACGAC GGCGTGTGCGACAACGTCGACAAGTGCCCGGACACCCCAGCCAACGTTACCGTTGACGCTGATGGCTGCCCAGCAGTTGCCGAAGTGGTTCGTGTTGAGC TGGACGTGAAGTTCGATTTCGACAAATCCGTAGTCAAGCCTAACAGCTACGGCGACATCAAGAACCTCGCTGACTTCATGCAGCAGTACCCACAGACCAC CACCACTGTTGAAGGTCACACTGACTCCGTCGGTCCTGACGCTTACAACCAAAAACTGTCCGAGCGTCGTGCAAACGCCGTTAAACAGGTTCTGGTTAAC CAGTACGGTGTTGGCGCTAGCCGCGTAAACTCGGTTGGTTACGGCGAAAGCAAGCCAGTTGCTGATAACGCAACTGAAGCTGGCCGCGCAGTTAACCGTC GCGTAGAAGCAGAAGTAGAAGCTCAAGCTAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTAGCCGCTTGTACTGAAAAGCCCGGCTTAGGCCGGGCTTTTCTTTGCCTGCGATTTGGCATTGCGTCTGTTCAGGCGGGCTTGATGTCAGCCGGCATTT AGCTGTGCGTGGCCCATCAGCGTTTGATTCAGCAGCTCATTGCTATACGCGGCAACCGCGCCGATCACCAGAATGGCGGGGCTCTTTAATTGGAAAGCGG CTGCGTCCTGTTGCATGTCATTCAGGGAGCTGCGGCATTCGCGCTGCCACGGTAGCGAAGCGTTCTCGATCATCGCCACCGGCATCTCGCCACTCATTCC GCCTGCCAGCAGGCTCTCGCGAATTTCCGCGAGTTTCGCCACGCCCATGTAAACCACCAGGGTGGTTCCGCCTTGCGCGAGCGCCTGCCAGTTGAGGGTG CTGTCGTCCTGAGTGTGAGCGGTGACCAGCGTCACGCCACGGCTAATACCACGCAGGGTCAGCGAAATGCCGCATTGTGTTGCACCGGCAAGACCCGCTG
Amino Acid Sequence
>thrombospondin type 3 repeat-containing OmpA/MotB protein
MKLKNTLGLAIGTIVAATSFGALAQGQGAVEIEGFAKKEYYDSDRNFKNDGNLFGGSVGYFLTDDVELRLGYDEVHNVRSDSGKNIKGADTALDALYHFN NPGDMLRPYVSAGFSDQSIGQDARRGRDGSTFANIGGGAKLYFTDNFYARAGVEAQYNIDQGNTEWAPSVGIGVNFGGGSKKVEAAPAPVAEVCSDSDND GVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQYPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVN QYGVGASRVNSVGYGESKPVADNATEAGRAVNRRVEAEVEAQAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site