Pseudomonas syringae B576, NG81_RS04855

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00267 duf1_3 IPR000160 GGDEF domain 155 334 3.8E-60
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 170 330 1.5E-48
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 13 147 3.84E-29
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 58 333 2.0E-69
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 17 131 8.6E-21
CDD cd17575 REC_WspR-like - - 17 144 6.44479E-86
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 164 333 1.4E-53
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 154 333 8.2E-60
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 165 332 6.9E-49
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 19 131 2.7E-18
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 174 332 6.59E-48
CDD cd01949 GGDEF IPR000160 GGDEF domain 172 332 4.24365E-63
Gene3D G3DSA:3.40.50.2300 - - - 1 153 3.7E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.