Strain | Pseudomonas aeruginosa PAO581 genome. [Details] | |
DNA Sequence Upstream of Gene |
CGCAACGTACCGCTGCTGGCGCACATGCTGTTCTGGTACTTCGCCGCGCCGGAATGGCTACCCGAGGACCTCAAGGCCTGGCTCTACGCCGGCAACATCG AGGCCGCCAGCGCTATCGTCGCGCTGACCCTGTACACCGCCGCGTTCATGAGTGAGGACATGCGCAGCGGCATCCGCGCGGTGCCCACGGTGCAACTGGA GGCCGCCCGCGCGCTGGGCTTCGGCTACCTGGCGAGCATGCGACTGGTGATCCTCCCGCAGGCCTTGCGGATCACCGTACCGCCGCTGATCTCGCAAACC CTCAACCTGTGGAAGAACACCAGCATCGCCACGGTGATCGGCGTCGCCGAGCTGATGTACCAGGCCGGCCAGGTGGAGAGTTCGACCTTCCGCAGCTTCG AGTCCTTTGCCTTCGCCACCGCGGCCTATCTCAGCGTATCGCTGCTGATCACCGGCGCCGCTGCCTGGTACCAGCAGCGCTATCCGGGAGTCGAACGGCG
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DNA Sequence for Gene |
>M801_4191
ATGACCACCCTGGAACTGATCGATAGCTACTGGCTGTACTTCCTCGTCGGCCAGTACCCCAACGGGCCGTTGGGCGGGCTGGCCCTGACCCTGGTCCTGG CCTCGCTGGCGCTGCTGCTGGCGCTGCCGCTGGGCATCCTGCTCGGCCTGGCGCGGGTCAGCCCCTGGCGCTGGCTGCGCTGGCCGGTCACCGCGCTGGT CTTCGTGGTGCGCGGGGTGCCGTTGCTGATGGTGATCTTCTGGGCCTATTTCTTCCTGCCGACCCTCACCGGCCAGCGCACCGACCAGTTCACCACCATG CTGCTGGCGCTTGTGCTGTTCGACGCGGTGTACCTGGCCGAGATCGTCCGCGCCGGCATCCAGGGCCTCGACCGTGGCCAGTTCGAGGCGGCGCGTTCGC TCGGCCTGGGCTACCTGGCGAGCATGCGCCTGGTGGTCCTCCCGCAGGCGCTGCGCAACATGCTGCCGTCGTTGGTCAACCAATTCGTCTCGACGATCAA GGAGACCTCCCTGGGCTACATCATCGGCCTGGCCGAAGTCAGCTTCATCGCCTCGCAGATCAATACCCAGGTGTTCACCCTGCCGACCCAGGTCTACCTG ATCCTCGGCCTCACCTATTTCATCCTGTGCTTCGGCCTGTCGCGTTTCGCCTTCTGGCTCGAACGCCGCCAGGCGCAGCGTGGCAATCCCAAGGAGGCCC GATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGGCTGGAAAAGGTCAACAAATGGTACGGCGCCTACCACGCCCTGGCGGATGTCGACGAACAGGTCGGCCGCGGTGAGGTGGTGGTGGTCTGCGGACC CTCGGGCTCCGGAAAATCCACCCTGATCCGTACCCTGAACCGCCTGGAACCGATCCAGGGCGGGCGCATCCTGATCGATGGCCAGGACATCCACGCTCCC GGCCTGGACCTCAATCGCTTCCGCTCGCACATCGGCTTCGTGTTCCAGCAGTTCAATCTGTTCCCGCACCTGAACGTGCTGGACAACTGCACCCTGGCGT CGCTCCGTTTGCGCGGCCTGAAACCCGCGGAGGCACGCCGCCAGGCCATGGCGCTGCTGGAGCGGGTCGGCCTGGCGGACAAAGCGGCGGCGTTCCCCGC GCGGCTTTCCGGCGGCCAGCAGCAGCGCGTGGCGATCGCCCGCGCGCTGGCGATGGAGCCGCCGCTGATGCTGTTCGACGAACCGACCAGCGCCCTCGAC
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Amino Acid Sequence |
>amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
MTTLELIDSYWLYFLVGQYPNGPLGGLALTLVLASLALLLALPLGILLGLARVSPWRWLRWPVTALVFVVRGVPLLMVIFWAYFFLPTLTGQRTDQFTTM LLALVLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVVLPQALRNMLPSLVNQFVSTIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYL ILGLTYFILCFGLSRFAFWLERRQAQRGNPKEAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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