Strain | Pseudomonas aeruginosa PAO581 genome. [Details] | |
DNA Sequence Upstream of Gene |
GTTCCCCCTGCGCGGCCTGGCTTCCGAGGGCGCCGAGCGCCTCGGCCCGCTGGCGCGCTTCGCCGATTACCTCTGGCACCTGGCGCTGCCGGTGGGTTCG CTGGTGGTCGGCGGTTTCGCCAGCCTGACCCTGCTGACCAAGAACAGCTTCCTCGACGAGATATCCAGGCAGTACGTCGCCACCGCTCGCGCCAAAGGGC TCAGCGAGCGCCGGGTGCTCTACGGCCATGTGTTCCGCAACGCCATGTTGCTGGTGGTGGCCGGGCTGCCGGCGGCGCTGGTCTCGGTGTTCTTCACCGG GTCGCTGCTGATCGAGGTGCTGTTCTCCCTCGACGGCCTCGGCCTGATGGGCTACGAAGCGGCGCTCGGCCGCGACTACCCGGTGGTGTTCGGCAGCCTG TTCATCTTCACCCTGCTCGGGTTGCTGGTGAAGCTGGCCGGCGACCTGGCCTACAGCCTGGTCGACCCGCGCATCGACTTCGCCGCGAGGAGACAGTGAG
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DNA Sequence for Gene |
>M801_2123
ATGGCCATCGTCCTTTCCCCGCTGCACCGCCGCCGCCTCGCCGCGTTCCGCGCCAACCGCCGCGGGCGCCTGGCGCTGCGGCTGTTCCTCGCGCTGTTCG TCACCTGCCTGTTCGCCGAGCTGATCGCCAACGACCGCCCGCTGCTGCTGGAATACCGTGGCCAGTGGTTCCTGCCGGTGCTGCGGGACTATCCGGAAAC CGCCTTCGGCGGCGAGCTGCCGTTCCCGCCGGACTACCGCGGCCGCTTCATGAGCGAACGCATCGCCCGCGACGGCTGGGCGCTGTGGCCGCCGATCCGC TTCGACGCGCGCAGCATCAACTACGCGCGCCCGGCGCCGGCGCCGCCCTCGGCGGAGAACTGGCTGGGCACCGACGACCAGGGCCGCGACGTGCTCGCGC GGGTGATCTACGGCCTGCGCCTGTCGATCCTCTTCGCCCTCGGCTTGACCCTGGCCTCGTCGTTGCTGGGAATCTGCGCAGGCGCGGTGCAGGGCTACTA CGGCGGCTGGATCGACCTGTTCGGCCAGCGCTTCATCGAGGTCTGGTCGGGTCTGCCGATGCTTTACCTGCTGATCATCCTCGCCAGCCTGGTGCAGCCC GGGGTCGGCTGGCTGCTGGCGATCATGCTGCTGTTCTCCTGGACCAGCCTGGTCGACGTGGTTCGCGCCGAGTTCCTGCGCGGTCGTCACCTGGAGTACG TCAAGGCGGCGCGGACCCTCGGCCTCGGCGACGCCGGGGTGATGTTCCGGCACATCCTGCCCAACGCCATGGTCGCGACCCTGACCTTCCTGCCGTTCCT GCTCTGTGGCGCGGTGACCACCCTGACCGCCCTCGACTTCCTCGGTTTCGGCCTGCCGCCCGGCTCGCCGAGCCTTGGCGAACTGGTCGGGCAGGGCCGC GACAACCTCCAGGCGCCCTGGCTCGGGCTGACCGTGTTCGTGGTCCTGGCGACCTTGCTCAGCCTGCTGGTGTTCATCGGCGAAGCGGTGCGCGACGCCT TCGATCCGAGGACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGAACCGGGAACTGTTGCGAGTGGAAAACCTGAGCGTCGCCTATGGCGACACGCAGGTCGTGAAGGGGATCGACTTCAGCCTGCGCGCCGGCGAGACC CTGGCCCTGGTCGGCGAGTCCGGCTCCGGCAAGTCGCAGACCGCCCACGCCCTGCTGCGCCTGCTGCCGGGCGCGGCGCGCCTGGGCGGCAGCGTGCGCC TGGACGGCGAGGAACTGCTCGCCCTGTCGCCGCAGGCATTGCTGGCGATTCGTGGGCAGCGCATCGGCATGGTGTTCCAGGAGCCGATGACCTCGCTCAA TCCATTGCAGCGCATCGGCCGCCAGGTCGGCGAGGGCCTGCGCCTGCATCGCCGCCTGCGTGGCGCCGCGCTGCGCGGGCGGGTACTGGAACTGCTCGAA CTGGCCGGCCTCGAGCAGCCGCGACGCCTGCTCGAGGCCTATCCGCACCAGCTCTCCGGCGGCCAGCGACAGCGAGTGATGCTGGCCATGGCGCTGGCTT
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Amino Acid Sequence |
>binding--dependent transport system inner membrane component family protein
MAIVLSPLHRRRLAAFRANRRGRLALRLFLALFVTCLFAELIANDRPLLLEYRGQWFLPVLRDYPETAFGGELPFPPDYRGRFMSERIARDGWALWPPIR FDARSINYARPAPAPPSAENWLGTDDQGRDVLARVIYGLRLSILFALGLTLASSLLGICAGAVQGYYGGWIDLFGQRFIEVWSGLPMLYLLIILASLVQP GVGWLLAIMLLFSWTSLVDVVRAEFLRGRHLEYVKAARTLGLGDAGVMFRHILPNAMVATLTFLPFLLCGAVTTLTALDFLGFGLPPGSPSLGELVGQGR DNLQAPWLGLTVFVVLATLLSLLVFIGEAVRDAFDPRT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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