Strain | Pseudomonas aeruginosa c7447m genome. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGGCCGATATCCGCCTCGTTGCCGTAGATCTGCGCGGTATCGATGGCGCGATAGCCCAGTTCGAGGGCGCTGCGCACCGAGTCGACGACGACCTGGC CGGTAAGGCGGAAGGTGCCGAGACCGAAGGACGGGAGGGGGTGGATGGTGGACGACATGGCTGCGCTCCGTGGGCGGGATGGCTCGAATGAAGCGCAGTG TGGCGGCTTACATCTCTTCGATTAAGACCCGAATCGAGCAAATTCATTTGCGCTGGAGTCACGAATCCAGACGGCCTTCACGGGAGGTATCCAGCGGAAA TCCCCGTCAGCCGCTGGCAGGACGCAGTTCATCGGATTCCTGCGAATACTGCTGATAACGATAATCTCTATCATTTACTCCATTTTTACATTTACATACA CTTGCCCCGCCGCGAATTCCTACGCCGGTTTCCCACATAAACAAGAAACGCAGCCGGTCGCGCCAACGGCCTGCCTGCGCCGCCATCCAGGACACTGCAG
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DNA Sequence for Gene |
>M802_4298
ATGAAACACGTCGTTTCCAGTGCGTTATTGCTCGGTCTCTCCTCGCTTTCCCTGGCCGCCCAGGCCGCTCCCATCGCCCTTGACCTTCCCGCCCAGCCCC TGGCCGCATCCCTCGAGCAATTGCAGGGCGCCAGCGGCCTGCGCATCCGTTTCGACCGCGCGGCCGTGGCCGACCGGCGCGCACCGGCCCTACGCGGCAC GCTGGAGCCAAGCGAGGCACTGCAGCGTCTGCTCGCAGGTTCCGGACTGAGCGGGGAGGTACGGGGCGGCGACGCCTGGGTCGAGGCCGCGGCGACAGGT GCCGGCATCGCCCCCGGCGACAGCGTCGACCTCGGCGCGCTCAGCGTGGTCGCCACCCAGGACCCGGCCACCGCCGCCATCACCGAAGACAGCGGCTCCT ACACCACGCGGGCGATGCGCACCTCGACCAAGCTGGCGATGTCGATCCGCGAGACCCCTCAGTCGGTCAGCGTGGTCACCCGCCAGCGCATGGACGACCA GGGCATGCGCGACCTCAACGACGCGGTGAAGGGCGTCACCGGCCTCACCGTGCAACAGTACGGGCCGGCCCGGGTGAAGTACGCGGCGCGCGGCTTCGAC GTCGACAACATCATGTACGACGGCCTGCCGACGAGCATTTCCACCTATACCCAGGACGTCATTTCCGCCGCCGACCTGGCCATGTTCGACCGCGTCGAAG TGGTGCGCGGCGCCACCGGACTGATGCAGGGCGCAGGCAACCCGGCGGCGGCGATCAACATGGTGCGCAAGCGTCCGACCCAGGACTTCCGCGCCTCCCT GCAAGGCAGCGTCGGCACCTGGGACCGCTATCGCAGCGAGGCCGACGTTTCCGGCCCGCTGAACAGCGAAGGAACCCTGCGCGGCCGCGCGGTGGTCGCC TACCAGAAAGGCAACAGCTTCCAGGACCACGTCAGCAGCGAACGCGGCGTGTTCTACGGGATCGCCGAAGCCGACCTGAGCCCGGACACCACCTTCGCCA TCGGCGCCTCGAACCAGAACGACAACCGCAACGACAACTGGGTAGGCCTGCCCAGCCCGCTGGGCGGCCGCCACCTGGACCTCAAGCGCTCGTCCTATTA CGGCGCCGACTGGTCCTACTGGGATACCGACACCACCCACCTGTTCAGCGACCTGACCCACCGCTTCGCCAACGGTTGGCAGATGAAGCTGGCCGCCGAC AAGCTGTGGGCGCGAATCAACATGCTCGGGCTGTACAACGACTGCTACTACTCGACCACCGGCTGCGCCAGCATGACCCAGAACCCCGGCGACTACAGCT ACACCGACGACCACGACAGCTATGACGCCTATGCCAACGGTCCCTTCCAGTTGCTCGGCCGCGAGCACGAGCTGGTGGTCGGCGCCAGCTATCGCCAGGA ACGCTTCGACGGCCACGGCGGCTGGGGCAGCCTGTTCAACAAGGACGGCACCCCCACCGGGCCGATGGACCCGACCCAGTGGGACCCGAGCTCGACTCTC AAGCCGAGGCTGAACACCAGCCTGTGGGGCATGAAGCTCGACCAGGAACAGAAAGGCGCCTACCTCACCACCCGGTTGAACCTCGCCGACCCGCTGAAAG TGATCCTCGGCGGGCGCCTGGACTGGTACAAGGCCGACGCCGATACCGACAGCTACAAGGTCACCCGCAACGTCACCCGCTATGCCGGGGTGATCTACGA CCTGAACCAGACCTACTCGGTCTACGCCAGCTATACCGACATCTTCAAGCCGCAGAGCAACTTCGACGCCGGCGGCGGCCTGCTCGACCCGATCACCGGC AAGAACTACGAGATCGGCCTGAAGGGCGAACACTTCGGCGGCGCGCTCAATTCGCAGATCGCTCTGTTCCAGATCGACCAGGAAAACCGCGCCACCGAGG ACGTCGGCGGCCCCTCGCCATGCCCCTTCAGCCCCACCTCGCGCTATTGCTCGCGCGCTTCGGGCAAGGTCCGCAGCCAGGGCGTCGACCTGGAGCTGAG CGGTGCGCTGAGCGACGACTGGCAGATGATGGCCGGCTATACCTACGTCGACGCCAAGTACAAGCACGACAGCAACAAGGCCAACGAGGGCAAGCCATTC GACGCGGCCAAGCCACGCCACCTGTTCAAGCTCGCCACCAGCTATACGCTACCCGGCGAACTGCACAAATGGCGCGTCGGCGGCGACCTGGCCACCCAGA GCAAGACCGAGGACAGCAGCACCGGTTTCCAGCAGGGCGGCTACACCGTGGTCAACGCCATGCTCGGCTACAAGGTCAACGAACGGATCGACACGCGGCT GAACTTCAACAACCTGTTCGACAAGTACTATTACAGCGGCATCGACTTCGGCAACCTCAACTACGGCGAGCCGCGCAACCTGATGTTCACGGTGAAGTAC TCGCTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCCGGACCGCCGGCGTGCCTCCGCAGGCGCGGCGGCGGTGTCCGAACGGCCCTTCGAGGCGCCTCAGCAGGGCCGATAGCGGCGCTCGAACTCGCTCGC CAACTGCTCCAGCGTGACGCTCCCCAGGCGCTCCAGGAGCAACGCCTGCGCCGCCTCGAACGCCTCGCCGAGCGCTTCGTTGACCGCCTGCTCGACCAGG CATTCCGGATGATCGGTAGACAGGCCGATGGCGAAGATCGAGGACGCTCCCAGCGCCTGGTGGATATCCAGCAAGGTGATGTCCGCCAACGGCTTGGCCA GCCGCCAACCGCCGCGATGGCCCTTCTCCGAACTCACGTAGCCTTCGTTCTTCAGCAGCGCCATGGTCCGTCGCACCACCACCGGGTTGGTGCCGAGCAT CTGCCCGATGGCTTCGGACGTCGCCGGCCCTTCGTGGCGGGCCATATGGATCAGCACATGGAGCATGCGCGAGAGGCGGGTGTCGTTTCTCATGAACGGC
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Amino Acid Sequence |
>TonB-dependent siderophore receptor family protein
MKHVVSSALLLGLSSLSLAAQAAPIALDLPAQPLAASLEQLQGASGLRIRFDRAAVADRRAPALRGTLEPSEALQRLLAGSGLSGEVRGGDAWVEAAATG AGIAPGDSVDLGALSVVATQDPATAAITEDSGSYTTRAMRTSTKLAMSIRETPQSVSVVTRQRMDDQGMRDLNDAVKGVTGLTVQQYGPARVKYAARGFD VDNIMYDGLPTSISTYTQDVISAADLAMFDRVEVVRGATGLMQGAGNPAAAINMVRKRPTQDFRASLQGSVGTWDRYRSEADVSGPLNSEGTLRGRAVVA YQKGNSFQDHVSSERGVFYGIAEADLSPDTTFAIGASNQNDNRNDNWVGLPSPLGGRHLDLKRSSYYGADWSYWDTDTTHLFSDLTHRFANGWQMKLAAD KLWARINMLGLYNDCYYSTTGCASMTQNPGDYSYTDDHDSYDAYANGPFQLLGREHELVVGASYRQERFDGHGGWGSLFNKDGTPTGPMDPTQWDPSSTL KPRLNTSLWGMKLDQEQKGAYLTTRLNLADPLKVILGGRLDWYKADADTDSYKVTRNVTRYAGVIYDLNQTYSVYASYTDIFKPQSNFDAGGGLLDPITG KNYEIGLKGEHFGGALNSQIALFQIDQENRATEDVGGPSPCPFSPTSRYCSRASGKVRSQGVDLELSGALSDDWQMMAGYTYVDAKYKHDSNKANEGKPF DAAKPRHLFKLATSYTLPGELHKWRVGGDLATQSKTEDSSTGFQQGGYTVVNAMLGYKVNERIDTRLNFNNLFDKYYYSGIDFGNLNYGEPRNLMFTVKY SL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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