Pseudomonas aeruginosa C7447m, M802_4210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.160.20.110 | - | - | - | 507 | 715 | 1.4E-24 |
| Pfam | PF13018 | Extended Signal Peptide of Type V secretion system | IPR024973 | ESPR domain | 1 | 49 | 5.2E-14 |
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 51 | 166 | 4.2E-45 |
| Pfam | PF07581 | The GLUG motif | IPR011493 | GLUG | 718 | 741 | 5.9E-5 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 55 | 305 | 1.1E-43 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 45 | 343 | 1.44E-43 |
| Gene3D | G3DSA:2.160.20.110 | - | - | - | 863 | 1006 | 2.2E-12 |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 88 | 162 | 4.5E-27 |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 54 | 409 | 3.6E-76 |
| PANTHER | PTHR12338 | AUTOTRANSPORTER | - | - | 591 | 784 | 8.6E-115 |
| Pfam | PF07581 | The GLUG motif | IPR011493 | GLUG | 647 | 677 | 0.0027 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.