Strain | Pseudomonas aeruginosa c7447m genome. [Details] | |
DNA Sequence Upstream of Gene |
GAACGCCGCGAACGAGGCGAAGAACGCGAAGCCCTTCAAGCCTTGCAGCGGCACCAGGCCATGCAGGGCCTTCCAGGTCGCCGCGTTGTAAAACACCACC AGAACCAGCGCGAACAGCATCACCAGCCGGGTCGAACCGATAGCCGGCAAGAAACGCTTGATACCCCCACCCATTGAAGCAACTCCTGAAACGTAACGGA CCGCCGCCACCCCCCGTGGCGGGGCGCCCGAACTCTATCGGGCGCCTGGTCAAAATTTCGTGAAGCCTCGCGAGCCCTCGCGGGCGCAGCGATCATGCCC GTGGCGAGGGAGCCGGAACAAGCTCAGCTATGCCTTTTCTCCCCGGGAAAATGCCGAAACCGGCCGTATGTCGGCGGCCAGCGACTTCCTTCCATGCCGA CCTTGCAGGTGGCTCCCGCTATCTATACTGGAAGCACAATGCCACCCCCAGCCCGCACCCGCGCCGTCCGCGGGTTTTCCGTGTCCAGGGAGACACCGCT
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DNA Sequence for Gene |
>M802_3429
ATGGATTGGCAAGGCCTGCGCTTCCTCGGAGAGTCTCCCGTCGACGGCTACGTGCTGCAGAACTGCACCTATTCGCCGTCGCTGGTGGCGCTCGCCTTCC TCGTCGCCTGCCTCGCCGGGTACACGGCACTGGACATGGTCGAGCGGGTCGGCAACAGCCTGAGCCACCCGCGCCTCTGGCAATGGATCGGGGCGTTCTG CCTGGGCAGCGGCATCTGGGCCACGCATTTCGTCGCCATGCTCGCGTTCCACGCGCCGATCGCCCTGCGCTACGACCTGCCGATCACCGGCCTGTCGCTG CTGATCGCCGTCGCCGCCTCGTACCTGGCGATGTACATGACCGCCCGCCCGCGCTTCGGCCTGCTGCCCTGCCTGCTCGCCGCCTGCTGCATCGGCCTGG GCATCGCTGCCATGCACTACACCGGGATGGCGGCGATGCGCTCGGTGGCCACCCAGTACTACCAGCCATCGCTGTTCGCCCTTTCGGTACTGATCGCCAT CGGCGCCGCCTTCACCGCCCTCGCCGCGGTCCCCTACCTGCGCGGCCGGCGCAGCGCGCGCTACCGCTACATGAAACTGATCGCCAGCCTGCTGCTGGCC GGCGCCATCGCCGCCATGCATTTCACCGGGATGGCCGCGCTGGTGCTCAGCGTACCCGCCGGCACGCCGCTGGAACTGCAAGCCAGCGCCGACTCGCTGC GCCTGGGCTGGCTCACCGGAGTGCTCGCCAGCGCCATCGCCGCCTGCGGCATCTGGGCCGCATGGTCGGAGAAACAACGGGAGCGCCGGCTCAGCGAAAA CAGCCGGGTCAACGCCCTGCTCAACCAGCTCGACCACGCCCACGCCTCGCTGCGCCAGATGGCTCGCTACGACAGCCTGACCGGCCTGCAGAACCGCACG GCATTCAACGAAGTGTTCGTCCAGCACCTGGAGAATTGTCGCCTGAGAGGCAAGGGCCTGGCGGTGATGTTCCTCGACCTCGATCACTTCAAGCGGATCA ACGATTCCCTCGGCCACGACTCTGGCGACCAACTGCTGAAGATCGTCTCCGAACGCATCCGCAGCGTGTTGCGCGATAGCGACGTGGTGGCGCGCTTCGC CGGCGACGAGTTCTGCGTGCTCGCCGACCTCACCCAGGACCACGAGGCGCACATCCTCTCGCAACGCCTGATGCAGAAGATGAAGGAACCCATCGCCCTG GACGGGCGCACCCTGGTGATGACCGCCAGCGTCGGCGTCAGCCTCTACCCGAACGACGGCGAGCAGTGCGAGGAGCTGCTGAAGAACGCCGGCCTGGCCC TGCACCAGTCCAAGGCCTGCGGGCGCAACAACGCGCAGTTCTTCAGCCGGCAACTGCTGGTGCGGGCGACCCAGGAACTGCAGATGGAGGAGGAACTGCG CCAGGCCCTGCGCGACGACCAACTGGAGCTGCACTACCAGCCGATCCTCGCCCTCGCCGACGGCGAGGTACACCAGTTGGAGGCATTGGTGCGCTGGCGC CATCCGACCCAGGGCCTGCTCGGTCCGGACCGCTTCATCGGCCTGGCCGAAGCCAACGGCATGATCGACCAGCTCGACGACTGGGTGCTGCGACGCGCCT GCCGCGACCTGCGCAGCCTGCACCTGGCCGGCCACGAACGGCTGCGGGTGGCGGTCAACTGCTGCGCCAGCAATCTCGGCCGGGCCAGCCTGGTCGACGA AGTCCGTCATGCGCTGGAGCAGGCCGGGCTGGCGGCGTGCTTCCTCGAACTGGAGGTGACCGAGGACGCGCTGATGTACAACATCGACCAGACCATCCCG CTGCTCGAACGCCTCCGCGAGCTGGGCGTCAGCCTGTCGATCGACGACTTCGGCACCGGCTATTCGTCGCTCGCCTACCTGCGGCGCCTGCCGCTGGACG CGCTGAAGGTGGATCGCTCGTTCATCATGGACATCCCCGCCTCGCAGCGGGACATGGAAATCGCCCAGGCGATCATCGCGATGGCCCAGAAGCTCCATCT GAAAGTCGTCGCCGAGGGCGTGGAGACCCCGCAGCAACTGGCGTTCCTGCGGGAGAACCATTGCGAGCTGGTACAGGGCTACCTGTTCAGCCGGCCACTG CCGCTGGCGGCCCTGGAAGAGTTCCTCCGCGCCTACCGCTTCGACGCCGCGCCGCCGCTGCGCAGCCTGAACCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGTTCACTCGACGGCGGTCCGGTATTGCTCCACCAGGGTCGCCGGATCGCGTTCGAGATAGCCCTGGCTGCCGTGCAGACGCATCAACTGCGCGGCCAAC CCACTCATCGGGGTGGCCGCGCCTTGCTCGCGGGACAGCTTCACCGCGGTATCGAGATCCTTGAGCAGGGTCCGTACGTGCCACTTGACCGGCTCGTAAC GGCTCTCGGCCATTTGCGGGGCGAGGATCTGCAACGGCTTCGAGTCGGCGAAGCCGCCCGCCAGCGCCGGAGCGACCAGGCTGGCGTCGACCCCGGCCCG CTCCGCCAGCGCCACCACTTCGGCGATCACCAGGGCGTTGCAGGCAACGATCATCTGGTTGCAGACCTTGGTCACCTGCCCGGCGCCCACCTCGCCCATG CGCGTCAGGCGCTGGCCAAGCCGGGAGAGGACCGGCCGCAGGCGTTCGATATCCGCTGCGCGTCCGCCGGCCATGATCGCCAGGCTGCCGCTTTCCGCGC
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Amino Acid Sequence |
>diguanylate cyclase domain protein
MDWQGLRFLGESPVDGYVLQNCTYSPSLVALAFLVACLAGYTALDMVERVGNSLSHPRLWQWIGAFCLGSGIWATHFVAMLAFHAPIALRYDLPITGLSL LIAVAASYLAMYMTARPRFGLLPCLLAACCIGLGIAAMHYTGMAAMRSVATQYYQPSLFALSVLIAIGAAFTALAAVPYLRGRRSARYRYMKLIASLLLA GAIAAMHFTGMAALVLSVPAGTPLELQASADSLRLGWLTGVLASAIAACGIWAAWSEKQRERRLSENSRVNALLNQLDHAHASLRQMARYDSLTGLQNRT AFNEVFVQHLENCRLRGKGLAVMFLDLDHFKRINDSLGHDSGDQLLKIVSERIRSVLRDSDVVARFAGDEFCVLADLTQDHEAHILSQRLMQKMKEPIAL DGRTLVMTASVGVSLYPNDGEQCEELLKNAGLALHQSKACGRNNAQFFSRQLLVRATQELQMEEELRQALRDDQLELHYQPILALADGEVHQLEALVRWR HPTQGLLGPDRFIGLAEANGMIDQLDDWVLRRACRDLRSLHLAGHERLRVAVNCCASNLGRASLVDEVRHALEQAGLAACFLELEVTEDALMYNIDQTIP LLERLRELGVSLSIDDFGTGYSSLAYLRRLPLDALKVDRSFIMDIPASQRDMEIAQAIIAMAQKLHLKVVAEGVETPQQLAFLRENHCELVQGYLFSRPL PLAALEEFLRAYRFDAAPPLRSLNQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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