Pseudomonas aeruginosa C7447m, M802_1015
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa c7447m genome. [Details] | |
| DNA Sequence Upstream of Gene |
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| DNA Sequence for Gene |
>M802_1015
ATGTCCAATGACAACGAAGTACCTGGTTCCATGGTTATTGTCGCACAAGGTCCAGACGATCAATACGCATACGAGGTTCCCCCTATCGATAGCGCGGCCG TTGCCGGGAATATGTTTGGCGACTTAATTCAAAGAGAAATATATCTACAGAAAAACATTTATTATCCAGTCCGATCTATTTTTGAACAAGGAACAAAAGA AAAGAAGGAGATCAACAAGAAAGTATCTGATCAAGTCGATGGCTTGCTAAAGCAGATCACTCAAGGAAAAAGGGAGGCCACAAGGCAAGAGCGAGTCGAT GTCATGTCGGCAGTCCTGCACAAGATGGAATCTGATCTTGAAGGATACAAAAAGACCTTTACCAAAGGCCCATTCATTGACTACGAAAAGCAGTCAAGCC TCTCCATCTATGAGGCCTGGGTCAAGATCTGGGAGAAGAACTCTTGGGAAGAAAGAAAGAAGTACCCTTTTCAGCAGCTTGTTAGAGATGAACTGGAGCG GGCGGTTGCCTACTACAAACAAGATTCACTCTCTGAAGCGGTAAAAGTGCTAAGACAGGAGCTCAACAAGCAAAAAGCGCTAAAGGAAAAAGAGGACCTC TCTCAACTGGAGCGGGACTACAGAACCCGAAAGGCGAATCTCGAGATGAAAGTACAATCCGAGCTTGATCAAGCGGGAAGTGCTTTGCCTCCATTGGTCA GTCCAACGCCAGAGCAATGGCTTGAACGTGCCACAAGACTGGTTACGCAAGCAATTGCTGATAAAAAGCAGCTGCAGACCACAAACAATACTCTTATCAA GAATTCCCCAACCCCTCTAGAAAAGCAGAAAGCCATCTACAATGGTGAGCTACTTGTGGATGAGATAGCCAGTCTACAGGCCCGCTTAGTTAAGCTGAAC GCCGAAACGACACGACGCAGGACAGAAGCAGAACGCAAGGCGGCCGAGGAACAAGCGTTGCAAGATGCTATTAAATTTACTGCCGACTTTTATAAGGAAG TAACTGAGAAATTTGGCGCACGAACATCGGAGATGGCGCGCCAACTGGCCGAAGGCGCCAGGGGGAAAAATATCAGGAGTTCGGCGGAAGCAATCAAGTC GTTTGAAAAGCACAAGGATGCGTTAAATAAAAAACTTAGCCTTAAAGATAGGCAAGCCATTGCCAAAGCCTTTGATTCTCTAGACAAGCAGATGATGGCG AAGAGCCTTGAGAAATTTAGCAAAGGCTTTGGAGTTGTAGGCAAAGCTATTGACGCCGCCAGCCTGTACCAAGAGTTCAAGATATCTACGGAAACCGGGG ACTGGAAACCATTCTTTGTAAAAATTGAAACACTAGCTGCTGGTGCGGCCGCCAGTTGGCTTGTGGGTATTGCATTTGCCACGGCAACAGCCACTCCTAT AGGCATTCTGGGGTTCGCACTGGTAATGGCAGTTACCGGGGCGATGATTGACGAAGACCTTCTAGAAAAAGCAAACAATCTTGTAATATCCATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCAAGCAAGGCCTCATTAAACCCTACGAGGCCTTTCCATACTTATAGAATAAAAAAACCATCCCCAAGGGAATTGAAAACAAATAACAAGACAAATAA AAGACTGCATACAAACCTGTTTTGGCAGGGGTTTCGGAGAAAAAACCCGTGACCCAGAACTCTCTTTCCGTATATTTTAAAGCGAAGTCTTCAACAAGCT TTACCGAGAAAGGAAACAGGATAGTACTGAGCCCAGCCACTACCAAGGGGTTAACTGATGCCAGGCTGGGAAATACGGAGCCTTTCCAAGCCACTAAAAC AAAGAAGAAAGCTCCCCAGAAAAACTTAGCCCAATAGTATTTAAAGCTCAATTAGCACCCCGTTCTGTCTGACCTGAGTTCAACAAAGCGTTCTAAACGA TTAGAACTTCTATCTTATCCATTTCTAACAACGATTCCCACCTAGCTCCCTTTAGTAGGCGTAACATGAAAAACCTTCATCGCTCCTAATCCGTTTCCCT
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| Amino Acid Sequence |
>colicin pore forming domain protein
MSNDNEVPGSMVIVAQGPDDQYAYEVPPIDSAAVAGNMFGDLIQREIYLQKNIYYPVRSIFEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVD VMSAVLHKMESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSEAVKVLRQELNKQKALKEKEDL SQLERDYRTRKANLEMKVQSELDQAGSALPPLVSPTPEQWLERATRLVTQAIADKKQLQTTNNTLIKNSPTPLEKQKAIYNGELLVDEIASLQARLVKLN AETTRRRTEAERKAAEEQALQDAIKFTADFYKEVTEKFGARTSEMARQLAEGARGKNIRSSAEAIKSFEKHKDALNKKLSLKDRQAIAKAFDSLDKQMMA KSLEKFSKGFGVVGKAIDAASLYQEFKISTETGDWKPFFVKIETLAAGAAASWLVGIAFATATATPIGILGFALVMAVTGAMIDEDLLEKANNLVISI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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