Pseudomonas aeruginosa PAO1-VE2, N296_5073
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE2 genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCACGCGGCCGTCCTCGCCTCGGTAGAAAACCATCGGCTCGTCGCAGATGCGTCGGCCGAGCGGCTTGCCGGCCAGTTCGTCGGGGGTGCAGGCCACGT ACCAGGCGTTCTTCGGAAACATCGTCGGATCCTCTCGTTGTTTTTGTAATTGGATCCAATGATTCGCGAGGCAACTTTTCCAAGTCAACCGCTTCTGTAC AAAAAATAATCTGTTCGATAGTCGCACATAAAAAACTTCAGGAATAAATTGCCAAATTATCTCGTTCCAGAGCCTTTCTCGGATTTCGCTGACAGTGGGA TATCCACTGGCCATCCGTTTTCTTGTCGTCAAAATGGATCCAATAGGATTGCGGCATCGACGCAACGGTGCCAGGGTGCCTGCGCTTGCCGTGCCTACAA CAACAAGAAAAAGGGTCTTCCCAATGATGGATTCCTGCATTCCCGCGCCTCGCTCCCGCCTGCCGTCGCTTCTTTCCTGTCCGCTCGGGGAGGGCCGCCC
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| DNA Sequence for Gene |
>N296_5073
ATGAACCGGGACTTGCGCCGCGCTCTCGACGACGAACCGATGCGTCCGTTCCAGTGGCTGGCGGTGGCTGTGTGTATCGTGCTCAACCTGATCGATGGCT TCGACGTGCTGGTGATGGCCTTCACCGCATCCTCGGTGGCCGCCGAATGGAACCTTGGCGGCGCCGAGATCGGCCTGCTGCTCAGCGCCGGCCTCTTTGG CATGGCCGCCGGCTCGCTGTTCATCGCGCCCTGGGCCGACCGCTGGGGGCGCCGCCCGCTGATCCTCGCCTGCCTGGCGCTGTCGGGCCTGGGCATGCTC GCCTCGGCGCTGAGCCAGGCGGCCTGGCAACTGGCGTTGCTGCGCGGGCTGACCGGACTGGGTATCGGCGGCATCCTCGCCAGCAGCAACGTGATCGCCA GCGAGTACGCCTCGCGCCGCTGGCGCGGCCTGGCGGTAAGCCTGCAGTCCACCGGCTACGCGCTCGGCGCGACCCTTGGCGGACTGCTCGCGGTATGGCT GATCGGCGCCTGGGGCTGGCGCTCGGTGTTCGTCTTCGGCGCTGGCCTGACCCTGGCGGTGATCCCGCTGGTCTGCCTGTGCCTGCCGGAGTCGCTGGAC TTCCTCCTGGCGCGCCGGCCGCCGCGGGCGTTGCAACGGGTCAACGCGCTGGCCCGGCGCCTGGGCCGCGCGGCGCTCGCGGAACTGCCGAGCCCGCCCG GTGGCGGAGCGGAGCACGGTAGCCGCCTCGCCCGGTTGCTTTGCGTTGCCCAGCGACGTACCACGCTGCTGCTCTGGGCGCTGTTTTTCCTGGTGATGTT CGGCTTCTACTTCATCATGAGCTGGACGCCGAAGCTGCTGGTCGCCGCCGGCCTGTCCACCGCCCAGGGCATCACCGGCGGCACCCTGCTGAGCATCGGC GGGATCTTCGGTGCCGCCTTGCTCGGCGGGCTTGCCGCGCGCTTTCGCCTGGAACGGGTGCTGGCGCTGTTCATGCTGCTTACCGCCGCTCTGCTCGCGC TGTTCTCGCTGAGCGCCGGGCTGCCCGGCGCGGCCTTGCCGCTGGGACTGCTGATCGGGCTTTGCGCCAACGCCTGCGTGGCCGGCCTGTATGCCCTGGC GCCGAGCCTCTACGACGCTTCGGTGCGTGCCACCGGGGTCGGCTGGGGGATCGGCGTCGGTCGCGGCGGGGCGATCCTCTCGCCGCTGGTGGCCGGGCTC CTGCTCGACGACGGCTGGCAGCCGCTGTCCCTCTATGGGGCGTTCGCGGCGGTGTTCGTCGTCGCGGCCGCCGTGTTGCCGCTGCTCGGTGCGCGGCGTC GCGAGCGCTCGCCGACGCTGGGAGACGCTGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCCGCCGGCGTTTCAGCGTTGGGCGGCGATGATTGCCTCGGCGATGGTGGTGCGGAACCAGTTCAGCGCCGCCGAGCGTTCGCTGCTCTCGTGCCAGT GCAGGGAGACGTCGAACGGCGGCAGGGTGAAGGGCAGTTCGAGCATGCGCATGCCGCCTTCGGCGACGAAGCGATAGGCGATCTGCGCCGGCAGGATGGT CAGCAGCTCGGTACCGGGAATGATCTTCGGCAGCACCGAGAAGTGCGGCACCCGCAGGCTGATGCGGCGCTGCACCTGCATGGCCTCGAGCACGTCCTCG GCGATGCCGTGGCCGGAGGTACGGGTCACCACGATGTGCCGCTCGGCCAGGTACTGCTCCAGGCTCAGGCTGTCGCCGATCCGCGGGTGGCGGTCGCTGA GCAGGCACACGTAGCGCTCGTGCAGGACCCGCTGGCTGCGCGCGCCGGGCACCGGCTGGCGGCAAATCGCCGCGTCGACCTTGGCGCTGCTCAGCCAGGC
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| Amino Acid Sequence |
>sugar (and other) transporter family protein
MNRDLRRALDDEPMRPFQWLAVAVCIVLNLIDGFDVLVMAFTASSVAAEWNLGGAEIGLLLSAGLFGMAAGSLFIAPWADRWGRRPLILACLALSGLGML ASALSQAAWQLALLRGLTGLGIGGILASSNVIASEYASRRWRGLAVSLQSTGYALGATLGGLLAVWLIGAWGWRSVFVFGAGLTLAVIPLVCLCLPESLD FLLARRPPRALQRVNALARRLGRAALAELPSPPGGGAEHGSRLARLLCVAQRRTTLLLWALFFLVMFGFYFIMSWTPKLLVAAGLSTAQGITGGTLLSIG GIFGAALLGGLAARFRLERVLALFMLLTAALLALFSLSAGLPGAALPLGLLIGLCANACVAGLYALAPSLYDASVRATGVGWGIGVGRGGAILSPLVAGL LLDDGWQPLSLYGAFAAVFVVAAAVLPLLGARRRERSPTLGDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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