Pseudomonas aeruginosa PAO1-VE2, N296_4831 (higA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1-VE2 genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATGCCTGACACGGGGCGCTGCGCATGGCGTGGCCCTACAGCGGATCCTCGGGCATTCCTCGATGATGATGCGGTATGCACATCTGTCGCCGGAGCACTT GGAATCGGCGATGCGCTTTTCTCCGATTACTCAGTCTGGCTACAAATTGACCACATGAGGATCTGTGGTAATCTGTAGTGAAGTTAACGCTTAACGTTAA GGGTTAATGAATGATTCTGACCTTTCGCTGCGACGAGACTCGTCAGCTTTTTGAGACGGGTCTTTCGAGGCGGTGGGGAGCGATCCTCACAGTCGCTACG CGTAAGCTCGCAATGCTTCATGCGGCTACGGAGCTTCGAGACCTGCGCTCTCCACCTGGAAACCGGTTGGAGCCGTTGCAGGGAAAGCGGGCGGGCCAAC ATAGCATCAGGATCAATGACCAGTGGCGTGTCTGTTTCGTCTGGACGGATGCGGGTCCCGAAGAAGTCGAAATAGTTGATTACCACTGAGGAGGTGGACC
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| DNA Sequence for Gene |
>N296_4831
|higA
ATGGCTACCAATGGTATGCGCCCCATCCATCCTGGGGAAATATTGCGCGATGAGTTTCTGATGGAGTTTGATATCTCTCCAGCTGCTCTAGCACGCGCTT TGAAAGTCTCCGCTCCGACAGTGAACGATATCGTTCGTGAGCAGCGTGGTATCTCCGCAGATATGGCGATTCGTCTGGGGCGTTACTTTGATACGTCCGC TCAGTTCTGGATGAATCTCCAGAGTGAGTATTCGTTAGCAACTGCTTATGCGGCGAATGGCAAGCAGATCGAACATGAGATTGAGCCGCTGCTTGCTCAC GGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGTGACGTTGATCGTAGAGCCCCGCAGATGCGGGGCTTTTTTATGCGAACCGTAAATCGGTAAAGGGGGGCGTAGACGGTTTGTAGTCGGTTTGTAGTC TGCCGACCAAAACAAAAAGGGGTTAGCTTGCGCTAACCCCTTGAAAAATATGGTGGCTACACCGGGACTTGAACCTGGGACATCAGCATTATGAATGCTG CGCTCTAACCGACTGAGCTATGTAGCCGAGTGGCGCGCATTTTCCGTATCTCGGGCGGGGCTGTCAACCCCTGGGGCTAGATAATTTTCTGATCTTTCAA TCGTTTAGACGGAAGGGGTCGGATCGCCGGAGAGCGGGCGGTGGGGAGGGACGGGAACGAAAAAGCCCCGGCACTTGGCCGGGGCTTTCCTGGGACGGGA AGGGGATTACACGTTGAAGCGGAAATGCATCACGTCGCCGTCCTTGACGATGTAGTCCTTGCCTTCCAGGCGCCATTTACCGGCTTCCTTGGCGCCCTGT
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| Amino Acid Sequence |
>addiction module antidote protein, HigA family
MATNGMRPIHPGEILRDEFLMEFDISPAALARALKVSAPTVNDIVREQRGISADMAIRLGRYFDTSAQFWMNLQSEYSLATAYAANGKQIEHEIEPLLAH G
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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